Osmia lignaria (orchard mason bee): 117602207
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Entry
117602207 CDS
T09775
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
KO
K12857
Prp8 binding protein
Organism
olg
Osmia lignaria (orchard mason bee)
Pathway
olg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117602207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
olg03041
]
117602207
Spliceosome [BR:
olg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
117602207
Complex C
U5 SnRNP specific factors
117602207
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_EIPR1
ANAPC4_WD40
NBCH_WD40
Beta-prop_SPT8
eIF2A
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Ge1_WD40
WD_LRWD1
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
117602207
NCBI-ProteinID:
XP_034175825
LinkDB
All DBs
Position
Unknown
AA seq
351 aa
AA seq
DB search
MPILDKRKGDDILALVPASKRTKNEVVFSSREKAVVQNGPPRTSNLFAPIMLLEGHQGDI
FSLEFHPEGQYLASTGFDRQIFIWNVYGECENISVMTGHSGAIMELHFSPDGNHLYTAST
DMTLGLWDIVAGTRIKKLKGHTSFVNSVSGARRGLTQLCSGSDDSTIRVWDPRKRGQCYT
LNNTYQVTAVTFNDTAEQVISGGIDNDIKVWDLRKNSILYKLKGHSDTITGLSLSPDGSY
ILSNAMDNTLRIWDVRPFAPYERCVKILSGHQHNFEKNLLRCAWSPDGSKVSSGSSDRFH
YVWDTTSRRILYKLPGHNGSVNDIDFHPKEPIVCSGSSDKQIYLGEIETTQ
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgccaattttagataaacgtaaaggggatgatattttagcattagttcctgcttcaaaa
aggactaaaaatgaagtggtctttagtagcagagaaaaagcagttgtacagaatggacca
ccaagaacatctaacttatttgcaccaattatgctccttgagggccaccaaggagatata
ttttctcttgagtttcatcctgagggtcaatatcttgcttctacaggctttgatagacaa
atttttatttggaacgtatatggtgaatgtgaaaatatttctgtaatgactggacacagt
ggagcaatcatggaattacattttagtcctgatggtaatcatttatacacagctagtaca
gatatgacactaggtctatgggatatagtggctggaactaggattaaaaaactgaaaggt
catacctcctttgtaaactctgtttctggagcaaggagaggtcttacacaactttgttca
ggtagtgatgatagtactatacgtgtttgggatcctaggaaaagaggacagtgttacaca
ctaaacaatacatatcaggtcactgctgtaacatttaatgacacagcagaacaagttata
agtggtggaatagataatgatataaaagtctgggatttaaggaaaaactctattctttat
aagcttaagggacattctgataccataactggattaagtcttagtccagatggttcctac
atactttctaatgctatggataacacattaagaatttgggatgtaaggccgtttgctcct
tacgaacgttgtgttaaaattctttctggacatcaacataattttgaaaagaatcttttg
aggtgtgcatggtcaccagatggtagtaaagtatcatctggatcatcagataggtttcat
tatgtttgggatactacaagtcgtaggatattgtataaattacccggtcataatggttct
gtaaacgatatcgattttcatccaaaggaaccaattgtttgctctggatctagtgataaa
caaatatatttaggagaaattgaaacgacacagtaa
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