Osmia lignaria (orchard mason bee): 117602524
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Entry
117602524 CDS
T09775
Name
(RefSeq) ATP-dependent RNA helicase p62-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
olg
Osmia lignaria (orchard mason bee)
Pathway
olg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117602524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
olg03041
]
117602524
03009 Ribosome biogenesis [BR:
olg03009
]
117602524
Enzymes [BR:
olg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117602524
Spliceosome [BR:
olg03041
]
Complex A
U1 snRNP components
U1 related factors
117602524
Complex B
117602524
Ribosome biogenesis [BR:
olg03009
]
Eukaryotic type
Pre-60S particles
Helicases
117602524
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_30
Mt_ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
117602524
NCBI-ProteinID:
XP_034176568
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MLRQITGAIGSLRLRTYGANYHTGSYRNVKERRNVYGNTNSNRNGRFENHKNNINSIPGN
LRKPNWNSETLKPFKKDFYIPHPNVQSRHPQDIDLFRQENQITLKGEKIPNPIQHFEEGN
FPDHVMQCIRKQGFSEPTAIQAQGWPIAMSGQNMVGIAQTGSGKTLGYILPALVHISSQQ
PLNRGDGPIALILVPTRELAQQIQDVAHTFSSLSYAKSTCIFGGAPKGKQARDLEQGIEI
CIATPGRLIDFLEHGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSA
TWPKEVRNLAEEYLVDYTQLNIGSLTLSANHNILQIIDVCEEHEKQSKLENLLQEISSVN
PNDGKTIIFVETKKKVENIARNIRRYGWPAVCIHGDKSQGERDHVLTEFRRKRNAILVAT
DVAARGLDVDDVKFVINFDYPTSSENYIHRIGRTGRSNNSGTSYAFFTPQNGRQAKDLIN
VLQEAKQVINPKLWELAEKTGNGIAQHRWGGDYRRRDNNFTKVHKRFEAVSYFNA
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgacagataacgggagctattggatccctcagacttaggacgtacggagccaat
taccatactggaagttacagaaatgttaaggagcggagaaatgtatacggaaatactaat
tccaacagaaatggacgttttgaaaatcacaaaaataacataaacagtattcctggcaat
ttgaggaaaccgaattggaattctgaaactttaaaacctttcaaaaaagatttttatata
ccacatcccaatgttcaatcacgtcatccacaagatatagatttgtttagacaagaaaat
caaattacacttaaaggagagaaaatacctaatcccattcaacattttgaagaaggaaat
ttccctgaccatgtaatgcaatgtattagaaagcaaggattcagcgaaccaaccgctatt
caagctcagggatggccaattgctatgtctggtcaaaatatggttggaatagcacaaact
ggatctggaaagactctaggatacattctgccagcattagtacatattagtagccaacag
ccgttaaatcgcggcgatggaccgattgctcttatcttagtaccaaccagagaattggcc
caacaaattcaagacgttgctcacacctttagttctctatcatatgcaaaaagtacctgt
atctttggtggtgcaccaaaaggcaaacaagcacgtgatttggaacaaggaattgaaatc
tgtatcgccacacctggccgattaatcgatttccttgaacatggtacaaccaatttacgt
agatgcacttacttagtgttggacgaagcagatagaatgcttgacatgggttttgaacca
caaatccgaaaaatcattgaacaaattagaccagacagacaagttcttatgtggtccgca
acttggccaaaagaagtacgaaaccttgcagaagagtaccttgtagattatacacaattg
aacattgggtcattaacattgtcagctaatcataacattctgcaaattattgatgtctgc
gaagaacacgaaaaacaatcaaaattggaaaatcttcttcaggaaattagtagtgttaat
ccgaatgatggaaaaacaataatttttgttgaaacaaagaaaaaagtggagaatattgcc
agaaatattcgtcgttatggctggcctgcagtatgtatacatggtgacaaatcacaaggg
gaaagagatcacgttcttacagagtttaggaggaaaaggaacgcaattcttgtagcaaca
gatgttgctgctcgtggattagatgtcgacgacgtaaagtttgtgatcaacttcgattac
ccaacatcatctgaaaactacattcataggatcggcaggacgggtcggtcaaataactca
ggaacaagttacgccttctttacacctcaaaatgggagacaagctaaagacctaattaac
gtactccaagaagcaaaacaagttattaatccaaaactttgggaacttgcggagaaaacc
ggaaatggtattgctcaacatcgatggggaggtgattatcgtaggcgagacaataatttc
actaaagtacacaaacgattcgaggcagtaagttattttaacgcgtag
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