Osmia lignaria (orchard mason bee): 117603115
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Entry
117603115 CDS
T09775
Name
(RefSeq) DNA damage-binding protein 1 isoform X1
KO
K10610
DNA damage-binding protein 1
Organism
olg
Osmia lignaria (orchard mason bee)
Pathway
olg03420
Nucleotide excision repair
olg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117603115
09124 Replication and repair
03420 Nucleotide excision repair
117603115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
olg04121
]
117603115
03400 DNA repair and recombination proteins [BR:
olg03400
]
117603115
Ubiquitin system [BR:
olg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
117603115
DNA repair and recombination proteins [BR:
olg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
117603115
TCR (transcription coupled repair) factors
Cul4-CSA complex
117603115
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Lgl_C
Motif
Other DBs
NCBI-GeneID:
117603115
NCBI-ProteinID:
XP_034177809
LinkDB
All DBs
Position
Unknown
AA seq
1138 aa
AA seq
DB search
MKAMSHHYVVTAHKPTAVTACVTGNFTSPTDLNLILAKNVRLEIYLVTPEGLRPLKEVGI
YGKIAVVKFFRPPHEKKDLLFLLTTRYNAMILECIGEGEDIEIITKAHGNVADRIGKASE
TGIKAVIDPKARVIGLRLYDGLFKIIPLDKDNPELKASSIRMDEQQVQDVNFLHGCANPT
LILIHQDINGRHVKTHEISLRDKEFVKIPWRQDNVEREAMMVIPVPSPICGAIIIGQESI
LYHDGTTYVAVVPPIIKQSTITCYAKVDNQGLRYLLGDMAGHLFMLFLEQEKKPDGTQVV
KDLKVELLGEISIPECITYLDNGVIFVGSRLGDSQLIKLITKADENGSYCVPMETFTNLA
PIVDMAVVDLERQGQGQMVTCSGAFKEGSLRIIRNGIGIEEHASIDLPGIKGMWALKIGG
GNFDNTLVLSFVGQTRILTLNGEEVEETDIPGFVSDEQTFHTGNVTNDLFIQITPTSARL
ISHETKTVVSEWEPENKRTISVVACNGTQVLCATGNDLFYMEISCGQIVPKGFATLQYEV
ACLDISPLDGNTEAKIAAVGLWTDISVRILTLPALEEINKELLGGEIIPRSILMTCFEGN
TYLLCALGDGSMYYFTLHKQNGILSDKKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI
YSSNHKLVFSNVNLKEVNHMCSLNAESYPDSLALATDSTVTIGTIDEIQKLHIRTVPLGE
SPRRIAYQESSQTFGVITMRVDIQDSSGVSIVRHSASTQAASTSSSSHIASHNKPTASDI
SQEIEVHNLLIIDQHTFEVLHAHMLMPNEYALSLISTKLGEDPTFYYVVGTARVNPDETE
PKMGRILLYHWNDGKLTQVAEKEIKGSCYSLVEFNGKLLASINSTVRLFEWTAEKELRLE
CSHFNNIIALYLKTKGDFVLVGDLMRSLTLLQYKTMEGSFEEIARDYNPNWMTAIEILDD
DTFLGAENCFNLFVCQKDSAATSEDERQQMQEVGQFHLGDMVNVFRHGSLVMQNLGESST
PTQGCVLFGTVSGAIGLVTQIPFSFYESLRNLEDRLTSVIKSVGKIEHNFWRSFNTELKI
EQCEGFIDGDLIESFLDLSPDKMAEVAMGLMIDDPSGMKKEATVDDLVKIVEDLTRIH
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaatgtctcatcattatgtagtaacagcacacaaacctacagctgtcactgcg
tgtgtgacaggtaattttacctcacctacggatctgaatctgatcctagcaaaaaacgtt
cgattagaaatttatctcgttactcctgaaggtttaagaccactgaaagaagttggaatt
tacggaaaaattgcagtcgttaaattctttagaccaccgcatgaaaagaaagatcttttg
tttcttttaactactcgttataatgctatgattttggaatgtattggagaaggagaagat
atagaaattataacaaaagcacatggaaatgtggcagatcgtattgggaaggcttctgaa
actggaattaaagctgtgattgatcctaaggcacgtgtgattggcctcagattatatgat
ggtctatttaaaatcatacctcttgacaaagataatccagagttaaaagcatcatcaata
cgtatggatgaacaacaagtacaagatgtgaattttcttcatggatgtgctaatcccact
ttaattttaattcatcaagatattaatggcagacatgttaaaacccatgaaatatcttta
agagacaaagaatttgttaagataccttggagacaagacaatgtggaacgtgaagctatg
atggttattcctgtaccttcacctatttgtggtgcaataataataggtcaggaaagcata
ttgtatcatgatggaactacatatgttgctgttgtaccaccaattattaaacagagtaca
attacatgttatgctaaagttgataatcaaggactcagatatttattaggagacatggct
gggcatttgtttatgctattcttagaacaagaaaagaagccagatggtacacaagttgtg
aaagatctaaaagttgaactgttgggagaaattagcataccagaatgcattacatattta
gataatggagtaatatttgttggtagccgtttgggtgattcacagttaattaaattaatc
acaaaagcagatgaaaatggttcctattgtgttccaatggaaacttttactaatttggca
ccgatagttgatatggcagtagttgatcttgaaaggcagggtcagggacaaatggttaca
tgttctggagctttcaaagaaggttctcttagaattatcagaaatggaataggcattgaa
gaacatgcaagtatagatttgccaggaatcaagggtatgtgggcattgaaaattggtgga
ggtaattttgacaatactttggtgttatcttttgttgggcaaaccagaatattaacttta
aatggggaagaagttgaagaaacagacattccaggctttgtttctgatgagcaaactttt
catactggaaatgttacaaatgatttatttatccagataacaccaacatctgccagatta
atttcacacgaaactaaaacagttgtgtctgaatgggaaccagaaaacaaaagaaccatt
agcgttgttgcttgtaatggcacacaagtactctgtgctacaggaaatgatttattttac
atggaaatttcatgcggacaaattgtaccaaaaggatttgctaccttacagtatgaagta
gcatgtctagatatatctccattagatggcaataccgaagcaaaaatcgctgcggtaggc
ttgtggactgatatttctgttcgtattttaactttacctgctttggaagaaatcaataaa
gaattacttggaggtgaaattatacctagatctattctaatgacatgctttgaaggtaat
acatatctcttatgcgctcttggagatggtagtatgtattactttactttacacaaacaa
aatggtatactttctgataaaaagaaagttactttgggtacacagccaacagtcctaaga
acattcagatcattgtctactaccaatgtttttgcatgttctgataggccgactgtaatt
tattcatcaaatcataaactagtattcagcaatgttaatttgaaagaagtaaaccacatg
tgttctttaaacgcggaatcatatcctgatagcttagcattagcaactgacagtactgtg
acaataggaacaatagatgaaatacaaaaactgcacattcgaacagttcctcttggtgaa
tcaccgagacgaattgcttaccaagaaagttctcaaacattcggtgtaataacgatgcgg
gttgatattcaagacagtagcggtgttagcattgtaagacattcagcatcaacacaggct
gcctcaacatctagcagcagtcacattgcatctcacaataagcctacagcaagtgatatt
agccaagaaattgaagtacataatctactcattatagatcaacatacttttgaagtttta
catgcacacatgttaatgcctaatgaatatgcattgtcattaatatcaacaaaattgggt
gaagatcctactttctattatgtggttggaactgcccgtgttaatcctgacgaaactgag
ccaaaaatgggtagaatacttttatatcattggaatgatggaaaacttacacaggttgct
gaaaaagaaatcaaagggtcatgttattctttggttgaattcaatggaaaacttcttgct
agtattaatagcactgttcgtttgtttgaatggactgcagaaaaagaactcaggctagaa
tgtagccactttaataacatcattgctctttacttgaaaacaaaaggagactttgtttta
gttggagatctcatgagatctcttacattgctacaatataaaacaatggaaggtagcttt
gaagaaattgcaagagattacaatccaaactggatgactgctattgaaattctagatgat
gatacattcttaggtgctgaaaattgtttcaatctttttgtttgtcaaaaggatagtgct
gctacgtcagaagatgaaagacaacaaatgcaagaagttggacaatttcacttaggtgat
atggtcaatgttttccgacatggatctttagtaatgcaaaatttaggtgaatcaagtact
cccacacaaggttgcgtattgtttggtaccgtcagcggtgcaattggtttggttacacaa
attccattttcattctatgaatctttaagaaatcttgaagacagattaacaagtgtaata
aaaagcgttggtaaaatagaacataacttttggaggagttttaatactgaactaaaaatt
gaacagtgtgaaggattcatagacggagatttgatagaaagttttctcgacttaagtccc
gataaaatggcggaagttgcgatgggtcttatgatcgacgatcctagtggcatgaaaaaa
gaagcaacagtagatgatcttgtaaaaatagtagaggatcttacaagaatacattaa
DBGET
integrated database retrieval system
