Osmia lignaria (orchard mason bee): 117603435
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Entry
117603435 CDS
T09775
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform X1
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
olg
Osmia lignaria (orchard mason bee)
Pathway
olg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117603435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
olg03041
]
117603435
Enzymes [BR:
olg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117603435
Spliceosome [BR:
olg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
117603435
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
nSTAND3
AAA_30
Flavi_DEAD
ResIII
SLFN-g3_helicase
T2SSE
nSTAND_NTPase5
Cas3-like_C_2
TsaE
Motif
Other DBs
NCBI-GeneID:
117603435
NCBI-ProteinID:
XP_034178494
LinkDB
All DBs
Position
Unknown
AA seq
886 aa
AA seq
DB search
MSKYRRKESSSEDSDSEEERRRRDIKERDEFANRLKAKDESKIRKVAMPAGSGAAEAAKR
LKIMETDMREKLLPKLRVESRRKYLEKRKEDKVAELEADIIDDEYLFEEEVLTDREKKER
DHKKQLLQLAKEHEKARELERVQRYHMPLEKGKLEPEPDVHENEPPQSEQSKWESDQMSS
AVFRFGAKDRKAQQDYDLLLEDEVEFVQALRMPGSERDRKREMSPPPQVKALQTIQETKK
SLPIYPFRNDLIQAIKDHQVLIIEGETGSGKTTQIPQYLYEAGFAENNKIIGCTQPRRVA
AMSVAARVAHEMAVKLGNEVGYAIRFEDCTSHRTRIKYMTDGTLHREFLSEPDLASYSVM
IIDEAHERTLHTDILFGLVKDITRFRTDLKLLISSATLDATKFSEFFDDAPIFRIPGRRF
PVDIYYTKAPEADYIDACVVSILQIHATQPHGDVLVFLTGQDEIETCQEMLQERVRRLGS
KLAELLILPVYANLPSDMQAKIFQPTPPGARKVVLATNIAETSLTIDNIVYVIDPGFAKQ
NNFNSRTGMESLMVVPISKASANQRAGRAGRVAPGKCFRLYTAWAYQHELEDNTVPEIQR
INLGNAVLTLKALGINDLVHFDFLDPPPHETLVLALEQLYALGALNHRGELTKLGRRMAE
FPLDPMMAKMLLASEQYRCSEEIATIAAMLSVNGAIFYRPKDKIIHADTARKNFHVPGGD
HLTLLNVYNQWQQSDFSTHWCYENFIQHRSMKRARDVREQLVGLMQRVEMDLVSGISETV
NVRKAITAGYFYHVARLSKGGHYKTAKHNQTVSIHPNSSLFQELPRWLLYHELVFTTKEF
MRQVTEIESKWLLEVAPHYYKPKELEDSTNKKMPKVAGRSRPDGTN
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatacagaaggaaagaatcctcaagtgaggatagtgatagcgaagaggaacga
cgtaggagggatatcaaggaaagagatgaatttgctaatagactcaaagctaaggatgag
agcaagatacggaaggttgctatgccagctggctctggagcagctgaggcagcaaagagg
ctcaaaatcatggaaacagatatgagagagaagctgttaccgaagctacgtgttgaatct
cgcagaaaatatttggaaaagcgtaaagaggacaaagttgctgaattggaagctgatatt
atcgacgatgaatacctattcgaagaagaagtattaacagatcgtgaaaagaaagaaaga
gaccataaaaaacaactgctgcaattggcaaaggaacatgagaaagctagggagctcgag
agggtgcaaagataccatatgcccttggaaaagggcaagctggaaccagaaccagatgta
catgaaaatgaaccaccacagtctgaacagagcaagtgggaatctgatcagatgtcatct
gctgtttttcgttttggcgccaaggatcgaaaagcccaacaggattacgatcttctattg
gaggatgaagtggaatttgtccaagcattacgtatgcctggcagcgaaagagacaggaaa
cgggaaatgagccctcctcctcaagtaaaagctttgcaaactatacaagaaacaaagaag
agtctcccaatttatcctttcaggaacgatcttattcaggccatcaaagatcatcaggta
ctgatcatcgagggagagacgggctcgggaaaaactactcagattccccaatatttatac
gaagcagggttcgcagaaaacaataaaataattggctgtactcaacccagaagggtggca
gctatgtcggtcgcggcgagagtcgctcacgaaatggctgtgaaattgggaaacgaagtc
ggttacgcgattcgtttcgaggattgcacttcccatcgtactcgtattaaatacatgacc
gacggtacactgcatcgtgaatttcttagcgaaccagatttagcttcctacagcgtgatg
atcatcgacgaagctcacgagcgtaccttgcacacggatatacttttcggattggtaaaa
gacatcacgagatttcgtacagacttgaaacttctgatttcatcggccactctggacgcg
acgaaattcagtgaattcttcgacgatgccccgatatttcggatacctggccgacgtttt
cccgttgatatctattatactaaagctcccgaggccgactatatcgacgcttgtgtggtt
tccatccttcagatccacgcgactcaaccgcacggtgatgttctcgtattcttaacaggt
caagatgaaatagagacgtgtcaggaaatgttacaagaaagggtacgtcgactgggatct
aaattggcggagttattgatactacccgtttatgcgaatctcccgagtgacatgcaggcg
aagatatttcaaccaacaccgcccggagcaagaaaagtggttcttgctaccaacatagca
gagacctcgttaaccatagacaatatagtgtacgtgatagatcctggattcgcgaagcag
aataattttaattctcgcacaggcatggagagtttaatggtggtaccaatcagcaaagcc
tctgctaatcagagagccggtcgagccggaagagtggcaccagggaagtgtttccgactc
tatacggcttgggcttatcaacacgaattggaagacaataccgtgccggaaattcagaga
atcaatcttggaaacgcggtgctgacattgaaagcgttaggaataaacgatctagtgcac
tttgacttcctggatccaccaccgcatgaaactctggttctggcattggaacaattatac
gcattaggtgctttgaatcatcgtggagagttaacgaaactcggtcgaagaatggccgag
tttcctttagatcctatgatggctaaaatgttactggctagcgaacagtaccgctgttcg
gaggaaatcgccaccatcgcggctatgctgtcggtgaacggagcgattttctacaggccg
aaggataaaattattcacgcagacacggcacgcaagaatttccacgtccctggtggcgat
catctgaccttgttgaacgtgtacaatcaatggcagcaaagcgatttcagcacccattgg
tgctacgaaaatttcattcaacatcggtcgatgaaacgagccagagacgtgagggaacaa
ttagtcggcctgatgcaaagggttgaaatggatcttgtttctgggatctcggaaacagtg
aatgttcgaaaggcaatcacggcgggttatttttatcacgtggcgcgattatcaaaaggg
ggacattataaaactgcgaaacataatcagacagtatcaatccatccgaatagttcgttg
tttcaagagttaccacgttggctactttatcacgagctggtgtttaccacgaaagaattc
atgcgacaggtaactgagatcgaaagcaaatggctcttagaagtagctccacattattac
aaaccgaaagagttggaagattctacgaacaagaagatgccgaaagtcgcgggaagatca
cgtccagatggaaccaattag
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integrated database retrieval system
