Osmia lignaria (orchard mason bee): 117603798
Help
Entry
117603798 CDS
T09775
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
olg
Osmia lignaria (orchard mason bee)
Pathway
olg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117603798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
olg03021
]
117603798
03036 Chromosome and associated proteins [BR:
olg03036
]
117603798
Transcription machinery [BR:
olg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117603798
Chromosome and associated proteins [BR:
olg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117603798
PBAF complex
117603798
GBAF(ncBAF) complex
117603798
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_3
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
117603798
NCBI-ProteinID:
XP_034179179
LinkDB
All DBs
Position
Unknown
AA seq
1018 aa
AA seq
DB search
MLALGPKKDGGPNTKFFESQEILTQLDGVKQWLLKNCKKYVQTDPPTNKSLATLIVQLLQ
FQEDNLGKNVSKPPMTRLPMKCFLDFKPGGGLCHILATAYRFKQEQGWRRFDFPVGKSGS
RMDRTVEMLMAAERALVQNRCMLIPIVYVRPDVDKSTAVKVKEAVRRHQGTIAENETDAT
HIIYPPVDPLEEEYARPCMRRERSVLLHWYYFPDSYDSWTALDLPWDFPEGTLTSTNMKS
VYKVSATWALDLDQYNEWMNEEDYEMDENGQKKIHKYRLSVEDLMAQPSHPPPSAKKPKR
KRSPSPPPKLAKRKSGRAPSGVQSASSSSSLAAPKKSRGGEEEDDLTQGMEDPPAEPRIV
EVVATPTNPPVTGQGNVPTSGTTLTTTGSKKQDNELQPLKSGNMADLDEPMEGDKGSSQS
TQDREERDTSKERGEGNKGDEPEDNVTEQTHHIVVPSYSAWFDYNSIHTIEKRALSEFFN
GKNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLIN
YQVDAESRPTPMGPPPTSHFHVLSDTPSGLAPVNPNPPKTPQPSAAKTLLDLEKKSNVIG
TEEKVSAGAMTNFGLKIDQYSRKPAVLKNKQAAGATRDWTEQETLLLLEGLELHKDDWNK
VCEHVGSRTQDECILHFLRLPIEDPYLEEGGPEGLGPLAYQPVPFSKAGNPVMSTVAFLA
SVVDPRVAASAAKAAMEEFAAIKDQVPAALLDQHLRNVQASANSDGKFDPAAGLAQSGIA
GTGPPEPPDDATAPSTTGSVPTTVATSPHSATPASIESKKEEQEKPKEAEVDQNQLEIPK
KEEDLKETEEDTKSTMDAEAMEAKEKKDKVVRDAQLQSAAAAALAAAAVKAKHLAAVEER
KIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAA
EFRARQQAHQRLAQEQQQQQQNQHPAWQPAAQQQQQQQPPSPQAAAQQPPAHTPPQQA
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgcttgctttaggacctaaaaaggacggtggacccaacacaaaattttttgaatcgcaa
gaaatcctcacacaactcgatggagtcaaacagtggctcctgaaaaactgcaagaagtat
gtacaaacggatcctcctactaataaaagtttagctactctgatagtccaattgttacaa
tttcaagaagataatttaggaaaaaatgtttcaaaacctccaatgacaaggcttcctatg
aaatgtttcttagattttaaaccaggaggtggcttatgtcatattcttgctacagcatat
cgttttaaacaagaacaaggatggcgtagatttgattttcctgttggaaagtcaggatct
cgtatggataggacagtggaaatgttgatggcagctgaaagagccctagtgcaaaacagg
tgcatgcttataccaattgtatacgtaagacctgatgtagacaaatcaacagctgtaaaa
gtaaaggaagcagttcgacgacatcaaggcactattgccgaaaatgaaacagatgctacg
cacataatttaccctccagtagatccattagaggaggaatatgcgcggccttgtatgagg
cgcgagagatccgttctacttcattggtactattttccagatagttacgattcttggact
gctttagatcttccgtgggattttccagaaggaacgcttacaagtacaaacatgaaatcg
gtatataaagtatccgcgacatgggcgttagatttagatcagtataacgagtggatgaac
gaagaagattatgaaatggatgaaaatggtcagaagaaaatacataagtacaggctatcg
gtggaggatttaatggctcaaccatctcatcctccaccttccgcaaagaaacctaaaaga
aaacgatctcccagtccgcctcctaaactagcaaaacgtaaaagtggaagagcaccatcg
ggtgttcagagtgcctcgtcctcgtcgtcgcttgcggcgccaaaaaaatcacgcggcgga
gaagaggaggacgatctcactcaaggaatggaagatccaccggcggaacctcggattgtg
gaagtagtggctacacctacgaatccacccgttacaggtcaaggtaacgttccaacaagc
ggtactacgttaacgacaacgggaagtaaaaaacaagataacgaacttcaaccacttaaa
tccggtaacatggcggacttagacgaaccgatggaaggtgacaagggaagttctcaaagt
actcaagatagagaagaacgagatacaagtaaggaaagaggagaaggtaataaaggagac
gaaccggaagacaacgttacagaacaaacacatcatatcgtcgttccaagttattcggct
tggtttgattataattcgatccatactatcgaaaagagagctttatctgaattctttaat
ggtaaaaataaatctaaaacgccagaaatttatctggcgtataggaattttatgatcgat
acctacagattaaatcccacggaatacattacatcaacagcctgtagacgcaatttggca
ggtgatgtatgcgcaatcatgcgtgtacatgcatttctagaacaatggggacttatcaat
tatcaagtagacgcagagtcaagaccaacacccatgggacctccgccaacatcgcacttt
catgtattatcggatacaccttctggcttagcacccgttaatcccaaccctccaaaaaca
cctcaaccatcagccgcaaaaacgttgctggatttagaaaagaaatcgaatgtaattgga
acggaagaaaaggtttcggccggtgcgatgacgaacttcggattgaaaattgatcagtat
tcgaggaaaccagcggttctaaagaataaacaagcagctggcgctactcgtgactggacg
gaacaagaaacacttttgttattagagggattggaattacacaaagatgattggaataaa
gtttgcgaacacgttggttctagaacgcaagatgaatgtattttgcatttcttacgacta
cctatagaagatccatatttggaagaaggtggaccagaaggtttaggcccattggcttat
caaccggtacctttctccaaagctggcaacccagtcatgagtactgttgcattcttggct
tcggttgttgatcctagggttgcagcgagtgcagctaaagctgctatggaagaatttgca
gccattaaggatcaagtaccagccgctttattagatcaacatttaagaaatgttcaagct
agcgcgaattctgatggtaagtttgatccggctgcgggattagcacagtcaggcatagct
ggtactggaccacccgaaccaccagatgatgcaacagcaccttcgacaactggaagcgta
ccaacgaccgtggctacttctccgcattcggcgactccggcttcgatagaatctaagaaa
gaggaacaggagaaacctaaagaagccgaagttgatcaaaatcaattagaaataccgaag
aaggaagaagatcttaaagagacagaagaagatacgaaatctactatggatgctgaagcg
atggaagcgaaagaaaagaaagacaaggttgtacgagacgctcaacttcagtcagcagct
gccgccgcgttagcagcggccgctgttaaggcaaaacatttggcggccgtggaagaacgt
aaaattaaatctctagtagcgctgctcgttgaaacacaaatgaaaaaattggaaattaag
ttacgtcacttcgaagaattggaaactacaatggaacgagaacgggagggacttgaatat
cagcggcaacagcttatcaccgaaaggcaacagtttcatttggaacagttgaaagccgct
gaatttagagctagacagcaagcgcatcagcgtttagctcaggaacagcaacaacaacaa
caaaatcaacatcctgcctggcaacctgctgcgcaacaacaacagcaacaacaaccacct
agcccgcaagcggcagctcaacaaccacctgcacacacgcccccgcaacaggcataa
DBGET
integrated database retrieval system
