Osmia lignaria (orchard mason bee): 117603904
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Entry
117603904 CDS
T09775
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
olg
Osmia lignaria (orchard mason bee)
Pathway
olg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117603904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
olg03041
]
117603904
03009 Ribosome biogenesis [BR:
olg03009
]
117603904
Enzymes [BR:
olg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117603904
Spliceosome [BR:
olg03041
]
Complex A
U2 snRNP components
U2 related factors
117603904
Complex B
117603904
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
117603904
Ribosome biogenesis [BR:
olg03009
]
Eukaryotic type
90S particles
Helicases
117603904
BRITE hierarchy
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_19
AAA_22
nSTAND3
SRP54
ResIII
T2SSE
Flavi_DEAD
AAA_25
AAA_7
ABC_tran
TsaE
Motif
Other DBs
NCBI-GeneID:
117603904
NCBI-ProteinID:
XP_034179380
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MSKRRIEVVDPYVKRKADGSTVSNNISVPTTAPKSQVQLNPYTGLPYTPRYHEFYKKRIT
LPVFEYRADFMRLLAQHQCIVLVGETGSGKTTQIPQWCVEYSSCIGNKGVACTQPRRVAA
MSVAQRVSEEMDVALGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLDAYQVIL
LDEAHERTLATDLLMGVLKEVIKQRPDLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHP
VEIFYTPEPERDYLEAAIRTVIQIHMCEEVAGDLLLFLTGQEEIEEACKRIKREMDNLGP
EVGELKCIPLYSTLPPNLQQRIFEPAPPTKPNGAIGRKVVVSTNIAETSLTIDGVVFVID
PGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEKAYKNEMQDNT
YPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDDDGNLTDL
GAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFVRPNESKKAADDAKMRFA
HIDGDHLTLLNVYHAFKQNFEDPQWCYDNFVNYRSLKSGDNVREQLSRIMDRFHLKRTST
DFTSKDYYINIRKALVNGFFMQVAHLERTGHYLTIKDNQIVQLHPSSCLDHKPEWVIYNE
FVLTTKNYIRTVTDIKPDWLLKIAPQYYDLQNFPQCEAKRQLEVIQARLDSKQYQEGF
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacggaggatcgaggtcgtggatccgtatgttaaacggaaggcagatggatca
acagtatctaataatataagtgtaccaacaacagcaccaaaaagtcaagttcaacttaat
ccttatactggactaccttacacaccacgatatcatgaattttataaaaagagaattact
ttacctgtatttgaatatcgtgctgattttatgaggttattggcacaacatcaatgtatt
gtactggttggagaaacagggtcaggtaaaactacacagataccacaatggtgtgtagaa
tattcaagctgtattggtaacaagggtgttgcttgtacccaaccaagaagagtagcagct
atgtctgttgcacagagagtttcagaagaaatggatgttgcattaggtcaagaagtagga
tatagcatacgttttgaggattgtagttctccaaaaactgtattgaaatatatgactgat
ggtatgcttcttcgtgaaggcatgtctgatcccatgcttgatgcatatcaagtgatattg
ttagatgaggctcatgaaagaactttagccacagacttacttatgggtgttttaaaagaa
gtgattaaacaaagaccagatctgaaacttgtgattatgagtgcaacactggatgctgga
aaatttcagcagtattttgataatgcacctttaatgaatgtacctggcagaacgcatcct
gttgagattttttatacacctgaacctgaaagagattatttagaagctgctatcaggact
gttattcagatacacatgtgtgaagaggtagcaggagatttacttttgtttttaactggt
caagaagagattgaagaagcctgtaaaagaatcaaaagagaaatggataatttaggtcca
gaagtaggtgaactcaaatgcataccactttattctacactgcctccaaatcttcaacaa
agaattttcgaacctgcaccaccaacaaaaccaaatggtgctattggcagaaaagtagta
gtctcaactaacattgcagaaacatcattaactattgatggtgttgtgtttgtgatagat
cctggatttgcaaaacagaaggtatataatcctagaattcgtgtagaatctcttcttgta
tcacccatcagtaaagcttctgcccagcaaagagcgggtagagccggtcgtaccagacct
ggaaaatgtttcagattatatactgaaaaagcatataaaaatgaaatgcaggataatact
taccctgaaatattaaggtccaatcttgggagtgttgtattacaattaaagaaacttggt
attgatgatttggttcactttgactttatggatccacctgcaccagaaactcttatgaga
gctttagaacttcttaattatttggctgcattggatgatgatggaaatctaacagatttg
ggagctgtgatggcagagtttccattagatcctcagttggcgaaaatgctgattgcatcg
tgtaatcataactgtagcaatgagatactaagcattaccgctatgctgtcagtcccgcag
tgttttgtgaggccaaatgaatcaaagaaagccgcggatgatgctaaaatgcgatttgca
catatcgatggagatcacttgacattattaaatgtatatcatgcttttaagcaaaatttc
gaagatccacaatggtgttatgataattttgtcaattaccgatctttaaaaagtggcgac
aatgtcagggaacaattgagcagaataatggacagatttcatttaaaacgtacctcaaca
gattttacatcaaaagattattatattaatattagaaaagcgcttgtgaatggtttcttc
atgcaggtcgctcatttagaaagaactggtcattatttgactatcaaagataatcaaatt
gtacaacttcatccgagtagttgtttggatcacaaaccagaatgggtaatttataatgaa
ttcgtactcacgaccaaaaattacatcagaacagttactgatatcaaacctgattggtta
ctaaagatagcaccacaatactatgatctacaaaattttccacaatgtgaagcaaagaga
caactggaagtgattcaagcgaggctagattcaaaacaatatcaagaaggattctaa
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integrated database retrieval system
