Osmia lignaria (orchard mason bee): 117604169
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Entry
117604169 CDS
T09775
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
olg
Osmia lignaria (orchard mason bee)
Pathway
olg03020
RNA polymerase
olg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117604169
09124 Replication and repair
03420 Nucleotide excision repair
117604169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
olg03021
]
117604169
03400 DNA repair and recombination proteins [BR:
olg03400
]
117604169
Enzymes [BR:
olg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117604169
Transcription machinery [BR:
olg03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
117604169
DNA repair and recombination proteins [BR:
olg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
117604169
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
117604169
NCBI-ProteinID:
XP_034179886
LinkDB
All DBs
Position
Unknown
AA seq
1175 aa
AA seq
DB search
MYALEDDQYDDEDAEEISSKLWQEACWIVINAYFDEKGLVRQQLDSFDEFIEMSVQRIVE
DSPQIDLQAEAQHTSGEIENPVRHLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIVKDGEDPIETQHQKTFIGKIPIMLRSKYCLLAGLSDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKSEIRSCLEHSSRPTSTLWINMM
AKSGASIKKSAIGQRIIAIIPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGTRGARPGVTKEKRIKYAREILQKEMLPHVGISDFCETK
KAYFLGYMVHRLLSASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRLYAQ
KFIDRGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPDQLMATLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRISRPLLIVEGQNLLLKKRHIDMLKERDYNNDGWQELVGSG
VVEYIDTLEEETVMIAMSPEDLRQEKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINSI
VAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSESKRIGDQEEQFEKPTRQTCQG
MRNAIYDKLDDDGIIAPGIRVSGDDVVIGKTITLPEADDELDSTTKRFTKRDASTFLRNS
ETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFSCE
GLTPDIIINPHAIPSRMTIGHLIECIQGKVSANKGEIGDATPFNDAVNVQKISTLLQEYG
YQLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHICNFCGLIAIANLRNNTFECKG
CKNKTQISQVRLPYAAKLLFQELMAMNIAPRLMVA
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtatgctcttgaagatgatcaatatgacgatgaggatgccgaagagatttcatcaaaa
ctttggcaagaagcatgctggattgttattaatgcttattttgatgagaaaggtcttgta
cgacaacaacttgacagttttgatgaattcattgaaatgtctgttcaaagaatcgttgaa
gattcaccccaaattgatttacaagcagaggcacaacatacttctggtgaaatagaaaat
ccagttagacatttattgaaatttgagcagatttacttatctaaacctactcattgggag
aaagatggtgctccatctcctatgatgcctaatgaggcaagacttcgaaatttaacatat
tcagcaccattatatgttgatataactaaaacaattgtaaaagatggagaagatcctatt
gaaacacagcatcagaaaacatttataggaaaaattccaattatgttgaggtcaaaatat
tgtttacttgctggtttatctgatcgtgacttaacagaattaaacgaatgtccattagat
cctggaggttattttattattaatgggtcagaaaaagtacttattgcacaggaaaagatg
gcaacaaatacagtttatgttttcagtatgaaagatggtaaatatgcgtataaatcagaa
attagatcttgcttagaacatagttcacgtcccacatctacattgtggattaacatgatg
gcaaaaagtggggctagtatcaaaaaatctgccataggacaacgtattatcgcaattata
ccatatattaaacaagaaattcctattatgattgtgtttagagcacttggatttgtagct
gatcgtgatattttagaacatatcatatatgattttgatgatcctgaaatgatggaaatg
gtgaaaccttctttagatgaagcttttgtaatacaagaacaaaacgttgctttgaatttc
attggtactagaggtgcaagacctggagtaacaaaagaaaaacgtattaaatatgccagg
gaaatattacagaaagaaatgcttccacatgtaggcataagtgatttctgtgaaactaaa
aaagcatacttccttggttatatggtacatagattactctcagcatctcttggcagaagg
gagttagatgatcgagatcactacggcaataaaagattggatttagccggtccactattg
gcatttttatttagaggattatttaaaaatttgatgaaagaagtacgattgtatgcacag
aaatttatagacagagggaaggacttcaaccttgagcttgctataaaaactaaaattatt
acagatggtttaagatattcacttgcaacaggtaattggggagatcaaaagaaagctcat
caagctagagctggtgtatcacaagtattaaacagattgacatttgcatcaacgctatct
catttaaggagagtaaattctccaattggaagagacggaaaactagctaaacctcgtcag
ttacataataccctgtggggtatgctatgtccagcagaaacccctgaaggtgctgctgta
ggtttggtaaaaaatttggcattaatggcttatatcagtgttggatctcaaccttctccg
attcttgaattcttggaagaatggtctatggaaaatttagaagaaattgcaccaagtgca
atagctgatgcaacaaaaatatttgtaaatggttgttgggttggtattcatagagatcca
gatcagttaatggctactttgcgtaaattgagaagacagatggacatcattgtatctgaa
gtgtctatgatcagagatattagagatcgtgaaatcaggatatatacagatgcaggaaga
attagtaggcctttattaattgtagaagggcaaaaccttttgttaaagaaaagacatatt
gatatgttgaaggaacgagattacaataatgatggatggcaagaattagttggtagtggt
gttgttgagtatattgatactttagaagaagaaactgttatgattgctatgtcacctgag
gatctgagacaggaaaaagaatatgcttattgtacaacatatacacattgtgaaattcat
ccagcaatgattttgggagtctgtgcatcgatcattccattccctgatcataatcagagt
ccaagaaatacttaccaaagtgctatgggtaaacaagctatgggagtatacattacaaat
ttccatgttcgaatggataccttggcacatgtgctatattatcctcataaacctttagtt
acaacaagatccatggaataccttagatttcgtgaattaccggctggaattaatagtata
gttgctatattgtgttacaccggttacaatcaagaagacagtgttattttgaatgctagt
gctgttgaaagaggattcttccgatctgtattttacagatcttacaaagattctgaatct
aagcgaatcggcgatcaagaagaacaatttgaaaaacctacacgacagacgtgtcaaggg
atgcgtaacgctatttatgataaattggatgatgatggaattattgctcctggaattcga
gtatctggagatgatgtagttataggtaaaactattactctgccagaagctgatgatgag
ttggatagtacaacaaaacgctttacaaaacgggatgcttcaaccttcttacgtaacagt
gaaactggtatagtagatcaagtgatgttgactttaaatagtgaaggatataaattctgt
aaaatacgagtacgtagcgttcgtataccacaaattggtgataagttcgcttcacgtcac
ggacaaaagggtacttgtggaattcagtatagacaagaagatatgccattttcatgtgaa
ggacttacaccagacataataattaatcctcacgctattccatcacgtatgaccattggt
cacttgattgaatgtatccagggaaaagtgtcagctaataaaggtgaaattggtgatgct
acgccgtttaatgatgctgtaaatgtacaaaaaatttctacacttttgcaagaatatgga
tatcaactaagaggaaatgaagttatgtacaatggtcacacaggccgcaagataaacgct
caagtatttttaggtccaacttattatcagcgtttgaagcacatggtagacgataaaatt
cacagcagagctcgaggtccggtacaaattttagtcagacaacctatggaaggtagagca
agagatggtggtttgcgatttggtgaaatggaacgtgattgccagatttcccatggagct
gcacaatttttaagagaacgtttatttgaagtctcagatccgtatcggatacacatatgt
aatttctgtggtttaattgcaatagcaaatttaagaaataatacatttgaatgtaaggga
tgtaaaaacaaaacacaaatttctcaagttagattaccgtatgcagccaagttacttttc
caagaacttatggcaatgaatatcgcacctcgattaatggtagcataa
DBGET
integrated database retrieval system
