Osmia lignaria (orchard mason bee): 117604445
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Entry
117604445 CDS
T09775
Name
(RefSeq) ATP-dependent RNA helicase dbp2 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
olg
Osmia lignaria (orchard mason bee)
Pathway
olg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117604445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
olg03041
]
117604445
03009 Ribosome biogenesis [BR:
olg03009
]
117604445
Enzymes [BR:
olg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117604445
Spliceosome [BR:
olg03041
]
Complex A
U1 snRNP components
U1 related factors
117604445
Complex B
117604445
Ribosome biogenesis [BR:
olg03009
]
Eukaryotic type
Pre-60S particles
Helicases
117604445
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
PRAI
Motif
Other DBs
NCBI-GeneID:
117604445
NCBI-ProteinID:
XP_034180395
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MRMAYRDRERGDRRGGGARGGGRFGGRDGSSGGSRFGSSSNRDNSFGNNNFKNRQPGERL
RKPRWDMNTLQPFRKDFYQPHPNVSTRTTHAVEAYRSDKEITVKGTNVPSPNIFFEEGGF
PEYVLNEIRRQGFGEPTAIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHINQQPR
LNRGDGPIALILAPTRELAQQIQQVASDFGVSSQVRNTCIFGGAPKGPQARDLERGVEIC
IATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSAT
WPKEVRNLAEEFLTDYIQINIGSLQLAANHNILQIVDVCEEFEKEGKLMKLLEEISNEPE
NKTIIFVETKRKVDDITRAINRYGWQAIGIHGDKSQQERDYVLNQFRNSRSAILVATDVA
ARGLDVEDVKFVINLDYPSNSEDYVHRIGRTGRSQRTGTAYAFFTPGNAHKAGDLIQVLE
EAKQVVNPKLYELSRNPGVYKRGRYGGRSGGGSGRGSGGRGGGSRGSRGGRDGDRGGRFD
RSNGGGDRGNKWNGNNSSLTSNKNCGIGGSNYGSKTFSQNSYGGASGGGSSSYSQNGSGY
GGSGGGGGGSSYRQQNGY
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgagaatggcataccgtgatcgcgaacgtggtgacagaagaggaggtggagcacgcgga
ggtggtcgttttggtggtcgggatggaagtagtggaggtagtagatttggtagcagttcc
aatagagataatagttttggaaacaataactttaaaaatcgtcaacctggtgaacggctt
cgtaaaccaagatgggatatgaatacgttacagccatttagaaaagatttttatcagccg
catcctaatgtatccacccgaactacacatgcagttgaagcttatcgttcggataaagag
attactgtaaaaggaacaaacgtgccaagtccgaacatattctttgaagaaggtggattc
ccagaatatgttttaaacgaaattcgcagacaaggtttcggagagccaaccgcaattcaa
gcacaaggttggcctattgctctgtctggccgtgatatggttggaattgctcagacagga
tctggcaaaacattagcatatattttaccagccattgtacatataaatcagcaacctaga
ttaaatcgtggcgatggacctatagctcttattttagcaccgacgagagaacttgcacag
caaattcaacaagttgcatcagactttggggtttcgtctcaagtgagaaacacgtgtatc
ttcggtggagctccaaaaggtcctcaagctagggatttagagcgaggtgttgaaatttgt
atagcaacaccaggacgtcttattgacttcctagaacgtggtacaacgaatttacgtaga
tgtacatatttagtactagacgaagccgatagaatgcttgacatgggcttcgagccccaa
attaggaaaattgtagaacaaatcagacccgatagacaaactcttatgtggtcagcgacg
tggccaaaagaagttcgtaaccttgcggaagaatttttaactgactatatacaaattaac
attggttctctgcaattagcagctaatcataacattcttcaaattgtcgacgtatgcgaa
gagtttgagaaagagggtaaacttatgaaacttttggaagaaatttcaaacgagccagaa
aataagacaattatttttgttgaaaccaagaggaaagtggacgatataacgcgtgcaatt
aataggtacggatggcaagcaattggcatccatggagataaaagtcaacaagaaagagat
tatgtattaaatcaattccggaatagcagatctgccattttagtagctacggatgttgca
gcgagaggattagatgtggaggatgttaagtttgtgataaatttggattatccgtccaat
tctgaagactatgtgcatcgtatcggacgtacgggacgttcacagcgtacaggaaccgcg
tacgcatttttcacacctggtaacgcacataaggctggtgacttaattcaagttctggaa
gaagcaaaacaagttgtgaatcctaaactgtacgaattatcaaggaatccaggcgtttat
aaaagaggtcgttatggtggacgtagtggaggtggtagtggacgtggttccggaggtcgt
ggaggaggttctcggggttctcgaggaggccgcgatggagacagaggtggacggtttgat
cgttcgaacggaggcggagaccgaggaaataaatggaatggaaataatagcagtttaact
tcaaataaaaattgtggtataggaggaagcaattacggtagtaaaactttctcacaaaat
agttatggtggagcttctggtggtggctccagcagttacagtcagaatggcagtgggtac
ggaggaagtgggggaggaggtggtggaagtagttataggcaacaaaatggttattaa
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