Osmia lignaria (orchard mason bee): 117604485
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Entry
117604485 CDS
T09775
Name
(RefSeq) intraflagellar transport protein 140 homolog isoform X1
KO
K19672
intraflagellar transport protein 140
Organism
olg
Osmia lignaria (orchard mason bee)
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
olg03037
]
117604485
Cilium and associated proteins [BR:
olg03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
117604485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
TPR_2
Beta-prop_WDR19_1st
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
TPR_GEMI5
TPR_12
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Clathrin
Claudin_2
Beta-prop_TEP1_2nd
SidE_PDE
DUF7775
ANAPC3
RepC
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
117604485
NCBI-ProteinID:
XP_034180472
LinkDB
All DBs
Position
Unknown
AA seq
1684 aa
AA seq
DB search
MSLYFDKRVQNPETASISTHAIWHANYPLLAVAAYSQDKGGFVTVYDDQGEPLQDVESPR
HSVSQVTALGWHPERRWLSAGWESGELKVWPGDTGSVEFNLIVTPHRDPITILQWSQHGG
RLVSADITGSIVGWKIDSRGQLLMMFHHELKDSFAEIVFKTIPPKPVFDISGLAKAAVAG
DERALDIFSSWRPRTAAPTAVATQKDNYAFYVGTTSGVIYFVDNQGQCTEVLNTNGAALQ
FLLHHQTRDSIIIMTDGLNIGHFQADPITGRLVELTKVKFSGRSDVSRTGPALCWAGGNT
LAILTGELGVRCWDLHTGDTYVLSPPDLSPGNIATPQEICTSISFCKSNGTLAAGTNLGT
IYLWKRKIEVDYDENGWLSVPESCTIHGTVKQLTWGATLLRNQLLAVNCITNVFILHQQP
MCAAYNDGVCASQLTPTQILIEIDDVSYTLKTDIQVQLVAINKEYIAVSSGRQMVIYRMH
RDSSVNTTLVTSFHCDTEKLLMYDHTLIVLTPLVIQLRSMEGTVLQTLPTLPEEGEPITM
DLTGQYLTVASLNGILKIWDLSKREAKLHTRAMATYEAINDFAEIIEARCNMDCRLVSIT
VAMTNLMPSSILYVWDIESDQIHEFDFAESNDIDEDDNSLAVKCRGRLVTTHYWDVDDPR
LLVCRAQRLDSRDSKYSTKQTNGNDYDVSKATVVLVSIFATSDHGIVIQDIKPVADENCR
VLGVQTPHIIILNSEKTAESSSKVRKVLMRDFEELGTCDAVTKKAVLDFSFHISVANMDE
AFKAIKSIKNEGIWKSLARMCVKTKQLNMALLCLGHMKQAKAARALREAMQDDSLNLEAK
VGILAVELGLYNDAEHLFREAERLDLLGKLLEARDKFKEAIELARNENKIREKTSCYNYA
KSLEKEGKIAEAIEMYTKAECHRFEVPRMLLVRPRELLAYLNNSDDPEIKNWHAQYIEST
GDMEGALRLYEQAKNTLAMTRLLCYFGREDEASDLVLRTNHAASAYHLAAYYESKNNVAH
AIHFYTIAKAYTNAIRLCKEHDMFEELWPLAVLAPRQTQIDVAKYYEENDQPDKAVLLYH
KAGLLHKALDIAFRTKQYSALQLIIMDVNADSDPALIEKCASYFVENDQIEKAVDLLATG
RKYMEALELIQQHNILLSEDLAEKMTLDKVDNDVEREKVRISILQRIGEIAFEQGNYHLA
TKKFTQAGNKLRAMKALLKSGDTEKICFFAQVSRQREIYIMAGNYLQSLDWQNQPEVLKN
IINFYSKGKAMDLLANFYVACAQVEIDEFQNYDKALDALNQASRCLAKVVTPRDPDIHKR
AVDLVNNRVTVIKRYLDIKKLFDRGETGAAMQQVRQLLDSQGPDLEQSVRRGDLFATITQ
HYIDIGDTDKARASIEELKRLVPGINLTYYYNVSVLEALGYKMKIQREESSEKEDDIEEL
LATGLLCGAIMSDHWEEVGWDKEALSHANVTLTWYLDGQVALLEPASGHRNHHSGRRPTF
LVPMYGGIWIMCVSLTEEEIRLLGQVRFPQQRCINYLTPDEEHEEIRAAWQNRMQNLSIS
CSLVCLIILGTAVLIGFFGLCRHQISAVLVTGVMYLLAATFALFTLTIIHFKRAQDRGAR
ILDGPEDGVIGGPAPRNVLKARRFTSSWSMDFGWGGVTLCALASAAWILLSKIMRFSPIA
AMIA
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgtactttgataagcgtgtacaaaatccggaaacagcatctataagtactcat
gcgatttggcatgccaattatcccttgttagctgttgctgcatactctcaagataaaggt
ggctttgttactgtctacgatgatcaaggagagcccttacaggatgtggaatcacctaga
cattcggtatcacaggtgacagctcttggttggcatccagaaagacggtggctttcagca
ggatgggaaagcggagaattgaaggtatggccaggtgatactggtagcgtcgaattcaat
ttgatagtcacaccccatcgtgatcctattacaattctgcaatggagtcagcatggagga
agattagtatctgcagatataactggttctatagttggctggaaaattgactccagaggt
caattgctgatgatgtttcaccatgagctaaaggattcttttgcagaaatagtatttaaa
acaattccaccaaaaccagtgtttgatataagtggtttagcaaaagctgcagttgcagga
gatgaaagagcattagatatatttagctcttggcgccctagaacagctgcaccaacagca
gttgcaactcaaaaagataattatgcattttatgttgggaccaccagcggcgtgatatac
tttgtcgataaccagggccagtgtacagaagttcttaacacaaatggtgctgcattacag
ttcctgttgcaccatcaaactagggattctattatcattatgacagatggtttgaatata
ggacattttcaggcagaccccattactggacgactcgttgaattaacaaaagtgaaattt
agcggtagatccgatgtatcacgaactggtccagcactttgctgggctggtggaaatact
ctagcaattctaacaggagaattaggtgttcgttgttgggatcttcatactggcgacact
tacgtgctgtctccgccagatttatctcctggaaatattgctacaccacaggagatttgt
actagcatatctttctgtaaaagcaatggtactttggctgctggtacaaatctgggaaca
atctatctatggaaacgaaaaattgaagtggactatgacgaaaatggttggctaagtgta
ccagaatcttgtaccattcatggaacagtgaaacagcttacatggggtgctactttattg
aggaatcaattgcttgcagttaattgcatcacgaatgttttcatcttacaccaacaacca
atgtgtgctgcatacaatgatggcgtttgtgccagtcaactcactcccactcagatctta
atagaaatcgatgacgtttcttacactttgaaaactgatattcaagtacaactggtcgct
attaacaaagagtacattgctgtttcctcgggtaggcaaatggtgatttacagaatgcac
agagatagttctgtgaatactaccctagtcacaagtttccattgcgacacagagaaactc
ttaatgtacgaccacactttgatcgttctgactcctctagttatacaattacgatcgatg
gaaggtacagttcttcagacgttacctaccttaccagaagaaggcgaaccgattacgatg
gacctcaccggacaatacctaacagttgcatctttaaacggtatcttaaaaatctgggac
ttgagtaaaagagaagctaagttgcataccagagcaatggcaacttacgaagcgatcaat
gactttgctgaaatcatcgaggcaaggtgtaacatggactgtcgtttagtgtccattaca
gttgctatgactaacttgatgcctagttcaattctgtacgtttgggatatagaaagcgat
cagatacacgaattcgattttgcagaatctaatgatatcgatgaagacgataacagtcta
gctgttaaatgtagaggaagattggtaactactcattattgggacgtggatgatcctaga
ctactagtatgtcgtgctcaaagattggatagtcgagattctaaatactcaacaaaacag
acaaatggaaacgactatgacgtttcaaaggctactgtagtcttggtgtcaatattcgcc
acatcagatcatgggattgtcatacaggacataaaaccagttgcagatgaaaactgtaga
gtactgggtgttcagactccgcatatcattattctaaactcagaaaaaactgcagaaagc
agtagcaaggtaaggaaagtgctcatgagagattttgaggaactgggtacatgtgatgct
gttacaaagaaagctgtactagacttcagcttccatatcagtgttgctaatatggatgaa
gctttcaaggcgataaagtccataaaaaacgaaggtatttggaagagtttggctagaatg
tgcgtgaagacaaagcagttgaacatggctcttttgtgtttggggcatatgaaacaagct
aaggctgcgagggcgcttagagaagctatgcaagatgatagtttaaatctggaagccaag
gtgggaatattagctgttgagctgggattatataacgatgctgaacacctttttcgcgaa
gcggaaaggctggatctattgggcaagcttctggaagctcgagataagtttaaggaagcc
atagagttggctagaaacgagaacaaaattcgcgaaaagacgagctgttacaattatgcg
aaatctcttgagaaggaagggaaaatagcagaggcaatagagatgtacacaaaagcggaa
tgtcatagattcgaagtcccaaggatgttgctcgtgagaccaagagaactcctagcgtat
cttaataattctgatgatccagaaattaaaaattggcatgcacagtatatagaatctaca
ggagacatggagggagcgttacgactgtacgaacaagccaaaaacactctagcaatgaca
agactactctgttattttggcagagaagatgaagccagtgacttagtgttacgaacaaat
cacgctgcctcggcgtaccacttggctgcgtactatgaatcaaaaaataatgtagcacac
gccattcacttttacacgatagccaaagcttacacgaacgcgattcgtttgtgtaaggag
cacgacatgtttgaagaattatggcccctggctgtgcttgcaccaaggcagacgcaaata
gatgttgcgaaatactatgaagagaatgatcaaccagataaggctgttttattgtaccat
aaagctggccttttgcacaaggctttggatattgctttcaggactaaacaatacagtgcc
ttgcagcttattatcatggacgttaacgcagattccgacccagcattgatagagaaatgc
gccagttactttgttgaaaacgatcagattgagaaagccgttgacttgctggctacagga
aggaagtacatggaagctttggaactgatccaacagcacaacattctcttaagcgaagat
ttagcagagaagatgaccctggacaaagtagacaatgatgtagaacgcgagaaagttcga
atctctatattacagaggataggagaaattgctttcgagcaaggtaattatcatttagct
accaagaagttcactcaagctggaaacaaattgagagccatgaaggctttattgaaatct
ggtgataccgagaagatctgcttcttcgcacaagtctcgaggcaaagagagatttatata
atggctgggaattacctgcagtcgttggattggcaaaatcaaccggaggtattgaagaat
attattaatttctattccaagggaaaagcgatggatctgttggcaaacttttatgttgct
tgcgcgcaagtggagatcgacgagtttcagaactatgataaagctctggatgctttgaat
caagccagcaggtgtcttgccaaggtagtcacaccgagggatcctgatattcataaaaga
gctgttgatttggtgaacaacagagtaactgtaattaaacgttacctagatatcaagaag
ttgttcgataggggcgaaacaggtgcagcaatgcaacaggtgcgtcaattgctagactct
caaggacctgatttggagcaatcagtacgccgtggtgacttgtttgcaaccatcacccaa
cattacatcgatatcggtgacacggataaagcacgtgctagtatagaggagttgaagcgt
ttagtacctgggattaatttaacgtattattataatgtaagcgtgttggaagcactgggt
tacaaaatgaaaatacaaagagaagaaagctctgagaaggaagatgatatagaggaactt
ttagcaactggattgttatgcggcgcgataatgtcggaccattgggaagaagtcggatgg
gacaaagaggctctcagccatgcgaacgttactctcacatggtacttggacggacaagtc
gcgttgctggagccggcttccggtcataggaaccatcattctggcagacgacccacattt
ctcgtcccgatgtacggcggtatttggatcatgtgcgtctcccttacggaggaggaaata
cgactactgggtcaggtacgtttcccgcagcagaggtgcattaactacttgacacccgac
gaagaacacgaggagattcgtgccgcctggcaaaaccggatgcagaatttgagtatctcg
tgttctctagtttgcctgatcattctgggcaccgctgttctcattggattttttggactg
tgcaggcatcagatatcggcggttctcgttaccggtgtgatgtacctactggcagccact
ttcgcattgttcaccttgacgatcattcatttcaaaagagcccaggatcgaggggcacgg
atattggacggtcctgaggatggtgttatcggtggaccggctccgcgtaacgtcctcaaa
gcgagacgattcaccagctcctggagcatggacttcggatggggcggagttacgctttgc
gccctcgcctcggccgcgtggatcttgctaagcaaaataatgcgtttcagccccatcgcg
gctatgatagcgtag
DBGET
integrated database retrieval system
