KEGG   Osmia lignaria (orchard mason bee): 117605405
Entry
117605405         CDS       T09775                                 
Name
(RefSeq) DNA ligase 1 isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
olg  Osmia lignaria (orchard mason bee)
Pathway
olg03030  DNA replication
olg03410  Base excision repair
olg03420  Nucleotide excision repair
olg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:olg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    117605405
   03410 Base excision repair
    117605405
   03420 Nucleotide excision repair
    117605405
   03430 Mismatch repair
    117605405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:olg03032]
    117605405
   03400 DNA repair and recombination proteins [BR:olg03400]
    117605405
Enzymes [BR:olg01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     117605405
    6.5.1.6  DNA ligase (ATP or NAD+)
     117605405
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     117605405
DNA replication proteins [BR:olg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    117605405
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     117605405
DNA repair and recombination proteins [BR:olg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     117605405
   NER (nucleotide excision repair)
    Other NER factors
     117605405
   MMR (mismatch excision repair)
    Other MMR factors
     117605405
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme FERM_N_2
Other DBs
NCBI-GeneID: 117605405
NCBI-ProteinID: XP_034182592
LinkDB
Position
Unknown
AA seq 941 aa
MFRLRRIASCTVYYIYSNNSQRLLFINKVHESNNVSLPTVNNFLHWIHFNSSLTKEDKDN
QDSVKRKRNDQNETTDHSLAENNTTKKSPSSLEKVNNKTGATLKTILSGTSKFHESSGSK
RKKSADKVKEDSAKNTPAQKKIKKPSLVKNQKESTNLKRKSESTSSRSDSSKSSDELDES
DKVEIKKTSGKSRKRLRIISPVDSSEEEEVLTFSESPKKSNSNVEEKVSTKEKEKSDEET
GGNEENNEEGKTDTKEDSTEKPAKKIHSFFAQKGNTKNTSGDKIKSVDKSYDPSTSNYHP
IDDACWKKNEKIPYIALTRTLELIEETSARLKIIEILSNYFRSVIVLSPNDLLPSIYLCL
NQLGPAYEGLELGIAETNLMKAIAQCTGRTLAQIKADVQEVGDLGIVAEGSRSNQRTMFQ
PAPLTVSNVYSKLKEIAQMTGSASTTKKLDKIQSLFVACRFTEARYLIRSLAGKLRIGLA
EQSALQALALACVTTPPEQTDPVVLDARKSMSSDSFKQKYEKIALTLKTTYCECPNYDKI
IPVILKEGVEALPNKCKLTPGIPLKPMLAHPTKGVQEVLTRFEGMKFTCEWKYDGERAQI
HLAENGEVSIYSRNQENNTSKYPDIIGRFNNTKGENVKTCILDCEAVAWDDENKKILPFQ
ILSTRKRKDANEADIKVQVCVFIFDLLYLNGEPLVKQPFIKRRALLKENFKEAEGEWKFA
NHLDTSSMEEVQDFLDESVKGNCEGLMVKTLEQDATYEIAKRSRNWLKLKKDYLDGVGDT
LDVVVIGGYIGKGKRTGTYGGFLLACYDQENEEYQSICKIGTGFTEEDLQKHSEFLKEHI
IPKSKPYYRYDPSLEPDHWFEPVQAWEIKCADLSLSPVHKAAVGIVDPEKGISLRFPRFI
RIRDDKSSEDATSAQQVATMYKSQEQIKNQAPTKLTEEDFY
NT seq 2826 nt   +upstreamnt  +downstreamnt
atgttcaggctcaggcgcattgccagctgcacagtatactatatatacagtaacaattcc
caacgtttattatttataaataaagtacatgagtcaaacaatgtttctctaccaaccgta
aataattttctgcattggatacattttaacagttcgcttactaaggaggataaagataat
caagacagtgttaaacgaaaaagaaatgatcagaatgaaactacggatcattcattggca
gaaaacaataccaccaaaaaatcaccttcctcattagaaaaagtaaataataaaacaggt
gcaacactcaaaacaatattatctggaacatcaaagttccatgaaagcagtggatctaaa
aggaagaaaagcgcagataaggtaaaagaagatagcgccaagaatacacctgcacagaaa
aaaataaaaaaaccctcattggtgaagaatcaaaaagaaagcacaaatttaaaaaggaaa
agtgaatcaacttcctctagatctgattcgtccaaatcatctgatgaattagatgaatca
gataaagtggaaataaaaaagacttctggtaaaagtagaaagagactgagaataatatca
cctgttgattctagcgaggaagaagaagttttaacattttcggaaagtccaaaaaaatca
aacagtaatgtggaagaaaaagtttcaactaaagaaaaagaaaaatctgatgaagaaact
gggggcaatgaagaaaataacgaagaaggaaaaactgatacaaaagaagacagtacagaa
aaacctgctaagaaaatacatagcttttttgcacaaaagggaaatacaaagaatacttct
ggagataagataaaatctgttgataagtcttacgatcctagtacgtctaattatcaccca
attgatgatgcctgttggaagaagaatgaaaaaataccgtatatcgcattaacgcgcacc
ttggaattaattgaggaaacaagtgcgcgcctgaagataatcgaaattttgtccaattat
tttcgttccgtcatagttttaagtccaaacgatttacttccaagtatatacttatgtctg
aatcagttaggtcccgcatatgaaggacttgagttaggtatagcggaaacaaatcttatg
aaagcgatagcgcaatgtactggtagaactttagctcaaataaaagcagatgttcaagaa
gttggagatttgggtattgtagcagaaggaagtcgttccaatcagagaacaatgtttcaa
cctgctccattaacagtatccaatgtatactctaaactgaaggaaattgcgcaaatgacc
ggttctgcatcaacgaccaagaaattagacaaaattcagtcactttttgtagcgtgtcgc
tttactgaagctagatatttaattagatccttggcgggtaaacttcgaattggtttagca
gaacagtctgctttacaggctttagcattagcatgtgtaacaactccaccagagcagacc
gatccagtagttttggatgcacgtaaaagcatgtcaagtgattctttcaaacagaaatat
gagaaaatcgcacttactctcaaaacaacatattgtgaatgtccgaattacgataagata
atccctgttatactgaaagaaggagttgaagcgttaccgaataaatgtaaacttacaccc
ggtatacctctgaaacctatgttagcacatcctactaaaggcgttcaagaagtattgaca
cgttttgagggaatgaaatttacttgtgaatggaagtacgacggggaaagagcacagata
cacctagctgaaaacggtgaagttagcatctacagtaggaatcaagaaaataataccagc
aaatatcctgacattataggacgatttaataatacaaaaggagaaaacgttaaaacttgt
attctggactgtgaagcggtagcgtgggacgatgaaaataaaaaaattctaccattccag
atacttagcacaagaaaacgaaaagatgcaaatgaagccgacattaaagtacaggtgtgt
gtatttattttcgatttgttgtatttgaatggagaaccattagtgaagcagccttttata
aaacgtcgagctttactaaaagaaaatttcaaagaagcagaaggggaatggaaatttgca
aatcatttagatacctcgagtatggaggaggtgcaagactttttagacgaatcggtcaaa
ggtaattgcgagggtcttatggtgaagacattggaacaagatgcaacgtatgaaatagca
aaacggtctcgaaattggttaaaactgaagaaagattacttagatggtgtaggtgatacg
ttggacgtagttgttattggtgggtatataggaaaaggtaaacgaacaggaacgtacgga
ggatttcttttggcttgttacgatcaagaaaatgaagaatatcagagtatttgtaagatt
ggtactggtttcactgaagaggatcttcaaaaacacagtgaattcttgaaggagcatata
ataccaaaaagtaagccgtactaccgttacgatccatcacttgaacctgatcattggttt
gaacccgttcaagcttgggagatcaaatgcgcagatttgtctctatcacctgttcataaa
gcagcagtgggtatcgttgatccagaaaagggtatatccttacgatttccacgatttatt
cgtattcgcgatgataaaagtagcgaggatgccacttcagcccaacaggttgcaacaatg
tataaaagtcaagagcagataaagaatcaagctccaacgaagttaacagaagaagacttt
tattag

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