Osmia lignaria (orchard mason bee): 117605411
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Entry
117605411 CDS
T09775
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
olg
Osmia lignaria (orchard mason bee)
Pathway
olg03430
Mismatch repair
olg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
117605411
03460 Fanconi anemia pathway
117605411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
olg03400
]
117605411
DNA repair and recombination proteins [BR:
olg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
117605411
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
117605411
NCBI-ProteinID:
XP_034182612
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MTEPTPTIEKSKKITAINKQTIHKICSGQVVFDLAGAIKELVENSLDSGATLIDIKLKDY
GKTCISISDNGSGVLEEDFAGLGLKHHTSKLKEFSDLTEVDTFGFRGEALSSLCSLAELS
IITRHSTSEHGFKLEFDHNGILQKKEACAREVGTTVHVKNIFKCLPVRAKEFTRNLKKEY
ARAIQVLYNYCIVSTDTKITCSNSVSGKSNVVVTTTNSSSILNNINIVFGKKASNGLLKL
ELLPPDEATLQEYNLRNDVAIDFEWDCYVSSCDHTVGRSTPDRQFFYVNGRPCDPAKVNK
LINHIYHKYNNKQYPFIFLNLKLNKQSTDINVTPDKRTIFCTQENLILAALKFSLISKWD
KLQGNLNVKPISELNFGTKRAISPANTNPPAKRFQNLQTSSNTEHLDENSVQYDNKNKII
EYDNYNVQNDISNQTKILDDAEMSISMLTIKQKFQEKENNLSKLVTTSTRIKYKAQLESA
KNSVAEDELKRELTKESFLKMEIIGQFNLGFIIARLEKDLFIIDQHATDEKYRFEKLNNE
TQLKTQKLIVPKALNLSSLNETILIEHQKTFEDNGFFFKINHEAESGQRVELTGMPVSGY
WQFGQEDIEELIFLIREGGVEHKENRIYRPSRVRQMLASRACRSAVMIGTALNNNEMQKL
VTQMAQMENPWSCPHGRPTIRHLLSLHLVHK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaccaactccaacaatagaaaaatcgaagaagattactgccataaataaacaa
acaattcataaaatttgttctggtcaggtggtgtttgatctggcaggtgcaataaaagaa
ctggtagaaaatagtttagatagtggtgctacattaattgatattaaattaaaagattat
gggaaaacatgtatcagtataagtgataatggaagcggtgttttagaggaagattttgca
ggattgggactgaaacatcatacatccaaactgaaagaattctcagatctgactgaagta
gatacctttgggtttcgtggagaagctcttagttcactctgctctttagctgaattaagt
atcattaccagacattccacaagtgagcatggttttaaattagaatttgatcacaatggt
atactgcaaaagaaagaagcatgtgcaagagaagtaggtactactgtacatgttaaaaat
atatttaagtgtcttccagtaagagcaaaagaatttacaagaaacctaaaaaaggaatat
gctcgagctatccaagtgctatataattattgcatagtttctactgatacaaaaataaca
tgttccaattcggtatcaggaaaatctaatgttgtagttactactacaaactccagcagt
attttaaataatattaatatagtgtttggcaagaaagcttcaaacggtcttcttaaactt
gagttactacctcctgatgaagcaacattacaagagtacaatttacgaaatgatgtagct
atagattttgaatgggattgctacgttagcagttgcgatcatactgtcggacgatctaca
cccgatagacaatttttttatgtaaacggtcgaccatgcgatcctgcgaaagtaaataaa
ttaataaatcacatttatcacaaatataacaataaacaatatccatttatttttttaaat
ttaaaacttaataaacaatcgaccgatattaacgtaactccggataaaagaactattttt
tgtacacaagagaatttaatattagcagctctgaaattcagtttaataagtaaatgggat
aagttacaaggaaacttgaatgtgaaacctatatctgaattaaattttggaacgaagaga
gcaatttcaccggcgaacacaaatcccccagcaaaaagatttcagaatttacaaacatca
tcgaatacagaacatttagatgaaaatagtgtacagtatgataataaaaataaaattatt
gaatatgataactacaatgtacaaaatgatatatcgaatcaaacaaaaatattggatgat
gctgaaatgtcaattagtatgttaacaataaaacaaaagtttcaagaaaaagagaacaat
ttatcgaagcttgttaccacgagtacaagaattaaatataaggcacaattggaaagtgct
aaaaattctgtcgccgaagatgaactgaaaagggaactaacgaaggaatcttttcttaag
atggaaataataggacaatttaatcttggttttataatagcccgtttggaaaaagatcta
tttattattgatcagcatgctactgatgaaaagtatcgcttcgaaaaacttaacaatgag
acgcaactaaaaactcagaaattaatcgttcccaaagcattaaatttgtcttctttaaat
gaaacaatattaattgaacaccagaaaacgtttgaagacaatggcttcttttttaaaatt
aatcacgaagccgaatcaggacagcgtgtagaactcacaggaatgccagtcagcggatat
tggcaatttggacaagaggatatagaagaactgatttttcttattagagaaggtggcgtg
gaacataaagaaaatcgtatataccgtccaagtcgtgtgaggcaaatgttagcatcaaga
gcttgtcgtagtgcagttatgattggtacagctcttaataataacgaaatgcaaaaatta
gttacacaaatggcgcaaatggaaaacccttggagttgccctcatggtagaccaacgata
agacatctattatcattacatcttgtgcataaataa
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