Osmia lignaria (orchard mason bee): 117605634
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Entry
117605634 CDS
T09775
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
olg
Osmia lignaria (orchard mason bee)
Pathway
olg03030
DNA replication
olg03410
Base excision repair
olg03420
Nucleotide excision repair
olg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117605634
03410 Base excision repair
117605634
03420 Nucleotide excision repair
117605634
03430 Mismatch repair
117605634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
olg03032
]
117605634
03400 DNA repair and recombination proteins [BR:
olg03400
]
117605634
DNA replication proteins [BR:
olg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
117605634
DNA repair and recombination proteins [BR:
olg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
117605634
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
Rad17
BRCT_2
RuvB_N
nSTAND3
AAA_14
AAA_5
AAA_assoc_2
AAA_17
AAA_30
AAA_16
AAA_33
RNA_helicase
RCF1-5-like_lid
AAA_19
DUF1824
AAA_7
PTCB-BRCT
AAA_18
Motif
Other DBs
NCBI-GeneID:
117605634
NCBI-ProteinID:
XP_034183058
LinkDB
All DBs
Position
Unknown
AA seq
1015 aa
AA seq
DB search
MSKDIRSYFQPVKANSGIPNATPSKAKKRTVISSDEDDEKSKSPIKQSKKSKLSKKNVIE
SDSDSEVVVISPSEVLGKTPVSRQEAPKVARKLQRKEAKCHRDHKFEDTLRQLDVSHIEK
KNSKENKVDKDSDLHESSTNNEKKKTTPVKKKETPEKPQVEKDKEQNEPTKKPSNSSSNE
DIEHSVPEYSNKSKHAKKPAKGTSSAFNLEVKRIAVKRKASPEKDVYEERVEKRKHHAAV
YMQYLQRGGARNPGSKEIPVGAENCLAGLSFVVTGVLDSLEREEAEELIKKYGGRIVSLP
SKRTNYVIVGDQPGTAKIAKANALNLKTISEDDLLEMIRTRPAGQSADIIQPRARSKHRQ
TQKSTKSDDMSPSPKKRAKISETKETEKLERSPHKKETSEKDEKKQLEKSSHKKENDSKL
EKTPSPVNKEQNETKTSDVKDVQVKHIARDINDNLSLEALVEKYRPKTMKQILGQQGEKS
NAKKLHNWLKNWNHNQNGRIKHSKPSPWAKNDDGAFFKAALLSGPPGIGKTTTAQVVCKE
LDFDLVEFNASDTRSKKLLKEAVSELLSNTSLKDYVTTCGKHNPTSKRVLLMDEVDGMAG
NEDRGGLQELIILIKNTEIPIICICNDRNNLKMRTLANYTYDLRFQKPRFEQIRGAMKSI
CFKENINISTEDLDRLIESTNQDIRQVINHLSLFVGKTATQEKSEKQHVNKDLKLGPWDV
VRKVFDAEEHKNMSIHDKSDLFFHDYSFAPLFIQDNYLMVTPHAPRNQTLDRVAKCAESL
ALGDIVEKSIRSNNNWSLLPVQACYSSVIPGTVMSGHIGGQINFPAWLGRNSKANKFDRL
IQELTIHMRLTTGASKEGVNLDYLKPLRNAITRPLVTAGMEGVDAAIDIMNKYHLLREDL
NSLIEVSLWPGDRDPMEAIDSKVKGAFTKTYNKNAAPVPYIVSGISKKKATSALQDEAAL
VEEEEEEVANSDDDTIETDKMIKAKKPTTTKKTESKAKNTSNQPSKRGRGRGKAK
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaggatataagatcctattttcagcctgttaaggcaaattcgggtattccgaat
gccaccccatcaaaggctaaaaagagaacagtaatttcctctgatgaagatgatgaaaaa
tcaaaatctccgattaaacagtccaagaaatccaaactatcaaagaagaatgttatcgaa
tccgattctgattctgaggtagtagtaatttctcctagtgaggtattgggtaagacaccg
gtaagcagacaggaagcacctaaagtagcaagaaagttacagagaaaggaagctaagtgt
catagggatcataaatttgaggatactctgcgacagttagatgtttctcatattgaaaag
aaaaattcaaaagagaataaagttgataaagattctgatttacatgaaagtagcactaac
aatgaaaagaagaaaaccacacctgttaaaaagaaagaaacacctgaaaagccacaggta
gaaaaagataaggaacaaaatgagccgactaaaaaaccttctaacagcagttccaatgaa
gatatagaacacagtgtgcctgaatatagtaacaaatctaagcatgcaaaaaaacctgct
aaaggtacatcatctgctttcaacctggaagtaaaacgcatagcagtaaaaaggaaagca
tctcctgaaaaggatgtgtatgaggaaagagttgagaaaagaaaacatcatgctgcagtg
tacatgcaatatcttcaaagaggaggagctagaaatccaggatcaaaagaaattcctgtt
ggtgctgaaaattgtctagcaggattatcttttgtggtaactggtgttttggattcttta
gaaagagaggaagctgaagaactcattaaaaaatatggtggaagaattgtaagtctacct
tcaaagaggactaactatgtcatagtaggcgatcaacctggaactgcaaaaatagcaaaa
gctaatgcgttgaacctgaaaacaatatctgaagatgatttgttagaaatgattcgtact
aggcctgcaggtcagtctgctgatataatacaacctcgtgcacgttcaaaacatagacaa
actcagaaatctacaaaatcagatgatatgtctccctcgccaaagaaaagagcaaaaatt
agtgaaactaaagaaacggaaaaattagaacgttcacctcacaaaaaagaaactagtgaa
aaggacgagaaaaaacaattagagaagtcatctcataaaaaggaaaatgatagtaaactt
gaaaaaacaccatcgccagttaacaaggaacaaaatgaaacaaaaacaagtgatgtaaag
gatgtacaagtgaaacatattgcacgtgatataaatgacaatttgtcattggaagcattg
gttgaaaaatacagacctaaaactatgaaacaaattttaggccagcagggagagaaaagc
aatgccaaaaagttacacaattggttaaagaattggaatcacaatcaaaatggtcgaatt
aaacacagtaaacccagtccttgggcaaaaaatgacgatggagctttctttaaagctgct
ttactatctggtcctcctggaattgggaaaacaacaactgctcaagttgtttgtaaggaa
ctagattttgacctagtagaatttaatgcttcggatacacgaagcaagaaacttttgaaa
gaagcagtatcagaacttctgtctaatacttcgttgaaagattatgtcacaacatgtggt
aaacacaatcctaccagtaaacgcgttttattaatggacgaggttgacggaatggctggt
aatgaggatcgtggtggtctccaagaattaatcattttaatcaaaaatactgagatccct
attatttgtatctgcaatgatcgaaataatcttaaaatgagaacgcttgctaattacacg
tatgaccttcgatttcaaaaaccaagattcgaacaaatcaggggagcaatgaaatcaatt
tgttttaaagaaaacattaatatatcaacagaagatcttgatcgtttgattgaatcgact
aatcaagacattcgacaagttataaatcatttatcactatttgttgggaaaactgctact
caagaaaaatctgagaaacagcatgtaaataaagatttgaaattaggaccttgggacgtt
gtaagaaaagtgttcgacgctgaggaacacaagaatatgagtatacatgataaaagtgat
ttatttttccatgattatagttttgcaccgttatttatacaagataactatttaatggtt
acaccacacgcgccaagaaatcaaacattagacagagttgcaaaatgcgctgaaagttta
gctttaggagatatagttgaaaaatctatcagaagtaacaataattggtctcttttacca
gtacaagcatgttattcttcagttatacctggaacagtaatgtctggtcatattggaggt
caaattaattttccagcatggcttggtcgcaactcaaaagctaacaaatttgatcgattg
atacaagagctaaccatacatatgcgtttgactactggtgcaagcaaggaaggtgtaaac
ttggattacttaaaacctcttagaaatgctattactaggcccttggtaactgctggtatg
gaaggtgtagatgcagcaatagacattatgaataaatatcatttactcagggaggacttg
aattctttaatagaagtttctttatggcctggtgatcgagacccgatggaagctatagat
agtaaggtaaaaggtgcctttacgaagacgtacaataaaaatgctgcacctgtaccatat
atagtaagtggtatatcgaagaaaaaagcaacatccgctttgcaagatgaagctgcctta
gtagaagaagaagaagaagaagtggcaaattctgatgatgatactattgagacagataag
atgattaaggcgaagaagcctaccacaactaagaaaactgaatcaaaagctaaaaatact
agcaatcagcctagtaaacgtggaaggggacgtggaaaagcaaagtaa
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