Osmia lignaria (orchard mason bee): 117606504
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Entry
117606504 CDS
T09775
Name
(RefSeq) endoribonuclease Dcr-1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
olg
Osmia lignaria (orchard mason bee)
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
olg03036
]
117606504
Chromosome and associated proteins [BR:
olg03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
117606504
microRNA pathway
RISC loading complex
117606504
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dsRBD
Dicer_platform
Dicer_dimer
Ribonucleas_3_3
PAZ
Helicase_C
Dicer_PBD
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
117606504
NCBI-ProteinID:
XP_034184897
LinkDB
All DBs
Position
Unknown
AA seq
1968 aa
AA seq
DB search
MAFPLNDQIYTKSFTPREYQVELFYAARNKNIIVCLGKTYEQTFIVIKLIQEFAANNRRL
LSEGGKRSLYILTDEEKCTIKSSYIQQLTDLKVLLCSTCSSSEFEETFETSHVLVLTSET
CTELLAEKKILPHQINLVIVDECHKFINDKKLKFILQTFLSCSNVPRIIGLAVPLFNLTQ
EAGRLGLEIEKVEATFKCEVETASDILSILRYSPKAKEYVVEYSNGEKGELHSTIRNYIL
HAIEFLRDHRHDPTEIYNEEFYEDIQKIPDPTEKPFEMMQDFLHILETLGPWCADRAALA
LLILTEKLKIKTPYERHYLLLNMVASVFIKIRALCDNAFEALSEKERVYKYTTPKVHRLL
QILKTYTPYYTKDNNNSHNKINGENSSQRLTVNNRENFIRDKFNQTKKANEENHKKPFKF
QRHMRGATDPDLLCGVIFVDKGFVAKVLFYLLNEISAHDEDLEFLSPLYTIERNTDDVSY
SKDLEIEHKKQEEVLKKFRIHECNLLISTSILEEGIDIPKCNFVMRYDFPKTYQSYVQCK
SRARAIDALHVLLVPKETSKECIWQLAQYHYIEKTLLIKCSNNEPSEDEENEADMYAAMI
PHYKPLSGDDAPKVTFNSAISLVNRYCAKLPSDTFTRLTPEWSIEPVIVDNMPMYICSLR
LPINSPVKYAVSSYPMPNRAMARRMAALQLCIDLHRKNEIDDNLLPIGKENFKAKPEDAE
VPALPDEIKIDFSEARPGTTKRRQYYYKKTANALTDCRPIVGVPSYLYHINMVLSCPLPE
EQNTRGRRIYPPEESAIGFGIITLKEIPKLCPFPIYTRSGEVHVKLKLSKNIVILNETQI
EKIATFLNYTFTNVLRLQQYLMLFDPNASENSYMIVPVKLDTDSDVTVDWEFLECIYNNR
TTVPTKVPEEERKDFKFDALKYHDAVIMPWYRNQDQPQYFYVAEICTNLNPKSSFPGHDY
STFEEYYFKKYGIQIQNLDQPLLDVDHTSARLNFLTPRYVNRKGVALPTSSEETKRAKRE
NLEQKQILVAELCAIHPFPASLWRQAVCLPCILYRINALLLANQIRCQVAQMINLGQENL
ASDFEWPALDFGWSLAEVLKKSKESEKAKMAKNDTTQLNSANNTIDNKYQNESEKKINNL
NKLDMEDLNEKEYEFQMENDNMTEKELEISNDEDELEIGTWSNDMAMNTIDCETNDLKSF
PVTVLPNNFNWSDVRYGSPACESDYDGYVSDDIYSDGFVDSSDESEDENRGLRISYMGEN
VAEAVEDEKQISKQEINKKILDLLETEKNLDTLWSYTDEQEESLIAKHRQTHYEFTKIRE
CEIMKNGSFISCDKEIVIKRKNSFNSQLEDNSSDHKYKVHVQSIVNLFTTEVLDNYNTLQ
LIKQKSNNSKFTYHPSNNLFSFDFQPELENHPGPSPSLILQALTMSNANDGINLERLETI
GDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVSNLNLYRLGRQKMLGESMIATKFEPHD
NWLPPCYYVPKELEQALIESGIPSTLWNQADIPTLQAVNPNEITQLVRETEQKLGIMKDE
LIRNEAMLSNSLDNLRCFIPYNLITQHSIPDKSIADCVEALIGAYLIACGPRGALLFMAW
LGIHVLPVEEVGIVQETEPEERIPGSTPYVKGTNEKGETTWAQIRYGKLEEPQNPLLRYI
PDPEQELQMMLDGYEELEKSIGYKFNDISYLLQAFTHASYQPNKLTDCYQRLEFLGDAVL
DYLITRHLYEDARQHSPGALTDLRSALVNNTIFASLAVRCGFHKYFRHLSPGLSVVINRF
VRIQEENGHSISEEYYLIGEEKCEEAEDVEVPKALGDVFESLAGAIYLDSGMSLDAVWSV
YYVIMKNEIEQFSTNVPKSPIRELLELEPETAKFGKPEKLADGRRVRVTVDVFGKGSFKG
IGRNYRIAKCTAAKCALKKLKQMQNYPRDKDRISELKHEKSRERLFKC
NT seq
5907 nt
NT seq
+upstream
nt +downstream
nt
atggcatttccactgaacgatcagatttatacaaaatcttttacacctagagagtatcaa
gtagagctattctatgctgctagaaataagaatatcattgtttgcctaggaaaaacttat
gaacaaactttcattgttattaaattaattcaagaatttgctgcgaacaatagaaggtta
ctaagtgaaggaggaaaacgatcattatatatattaacagatgaagaaaaatgtactata
aaatcaagttatatacaacagttaacagatttaaaagtattactatgcagtacttgttca
tccagtgaatttgaagaaacatttgagacttctcatgtgttggttttaacatcagaaaca
tgtacagaattattagcagagaaaaagatcttaccccatcagataaatctagtcatagtt
gatgagtgccataaatttataaatgataagaaattaaaatttattttacaaacttttcta
tcttgttccaatgttcctagaattattggattagctgtaccattatttaatttaacacaa
gaagctgggagactaggattagaaatagaaaaggtagaagctacatttaaatgtgaagtc
gaaacagctagtgatatattatctatattaaggtatagtcctaaggctaaagaatatgta
gtggaatattccaatggtgagaaaggagaattgcacagtactattagaaattatatatta
catgccattgaatttttacgcgatcatcgtcatgacccaacagaaatttataacgaagag
ttttacgaggatattcagaaaatacctgatcctacagaaaaaccttttgaaatgatgcaa
gactttttgcacatattagaaactcttggaccatggtgtgcagaccgtgccgcacttgct
cttttaatcttaaccgaaaaattgaaaataaaaaccccatatgaaaggcattatttatta
ttaaacatggttgcgtcagtttttattaaaataagagcactgtgcgataacgcattcgaa
gctttatctgaaaaagagagggtatataaatacactacaccgaaagtccatagattacta
caaattttgaaaacatatacaccgtattacaccaaggataacaataattctcataataaa
ataaatggcgaaaatagttctcaaagattaactgtaaataatagagaaaattttattagg
gataaatttaatcaaactaagaaagctaatgaagagaatcataagaaaccatttaaattt
caacgacatatgcgcggagctacagatccggatttactttgcggagtaatttttgtagat
aaaggatttgtagcaaaagttctgttttatttattgaacgaaatatctgcgcacgatgaa
gatttagaatttttatcgcctctttacacgattgaaagaaatactgatgatgttagttat
tcaaaagatttagaaatagagcacaaaaagcaggaagaagttttgaaaaaatttagaata
cacgaatgtaatttattgatttcaacttcaattttagaagaaggtatagatattccgaaa
tgtaactttgtaatgagatacgattttccaaaaacttaccaatcctatgtacagtgtaaa
agtcgagctagagcaatagatgccttacacgtattattagtaccaaaagaaacgtcaaag
gagtgcatatggcaattagcacaatatcattatatagaaaagactttgttaataaaatgt
tctaataacgaaccatctgaagacgaagaaaatgaagcagacatgtacgctgctatgata
ccacactataaaccactcagtggagatgatgcacctaaagtaacgtttaattctgctata
tcattggtaaacaggtactgtgctaaattacctagcgatacttttacaagattaactcca
gagtggtctatcgaaccggtgattgtagacaatatgcctatgtacatttgttctttgcgt
ttacctataaattctccagtaaagtatgcagtatcgtcatatcctatgcctaatagagct
atggcaagacgaatggctgctttgcagttatgcatcgatttacacagaaaaaatgaaata
gatgataatttattacctattggaaaggagaatttcaaagctaaaccagaagatgccgaa
gtacctgctttaccagatgaaattaaaatagacttctctgaagctcgacctggaacaact
aaacgtagacaatattattataaaaagacagcaaacgcattaacagactgtagaccaata
gttggagttccttcttatctgtatcatattaacatggttctaagttgtcccttacctgaa
gagcagaatactagaggtcgacgaatatatcctcctgaagaatcagctattggttttgga
ataataacactgaaagaaatccctaaattatgcccatttccaatttatactagatctgga
gaagttcatgtaaaattgaaactcagtaaaaacattgttattttgaatgaaacacaaata
gagaaaattgcgactttccttaattatacttttacaaatgtactgcgattacagcaatat
ttaatgctattcgatcctaatgcttctgaaaactcatatatgattgtacctgtaaaatta
gacacggattctgatgtcactgtggactgggagtttttagaatgtatatataataatcga
actacagtgccaactaaggttcccgaagaggaaagaaaagattttaaatttgatgcatta
aagtatcatgatgcagtaattatgccttggtataggaatcaggaccaacctcagtatttt
tatgttgctgaaatttgtacaaatttaaatcccaagtcttcttttcctggccacgattac
agtacttttgaagagtactattttaagaaatatggaatacaaatacaaaatttggatcaa
cctttgttagatgtagatcatacatcagctagattaaactttttaacacccagatatgtt
aatcggaaaggcgttgctttgcccacaagtagcgaagaaacgaaacgagcaaaacgagaa
aatttagaacaaaagcaaattcttgttgctgaattatgtgctattcatccttttccagca
tcattgtggagacaagcagtttgtctaccttgtattttatatagaattaatgccttgtta
cttgctaatcaaatacgatgtcaagttgcacaaatgataaatttaggacaagaaaattta
gcttccgattttgaatggccagcattagattttggatggagtttagctgaagttttaaaa
aaatccaaagaatctgaaaaagcgaaaatggctaaaaatgatactactcaactaaattca
gcaaacaacacaatagacaacaaatatcaaaatgaatctgagaaaaagataaataattta
aacaagcttgacatggaagatttaaatgaaaaagaatacgaatttcaaatggaaaatgat
aatatgacagaaaaagagctagaaatatcaaatgacgaagacgaattagaaattggcact
tggtcgaatgacatggcgatgaatactattgattgcgaaacaaatgacttaaagtcattt
cctgtgactgttttaccaaataattttaactggagtgatgttcgatacggttcccctgcg
tgtgaatcagattatgatggatatgtatcggatgatatctatagtgatggatttgtagat
agttcagatgagagtgaagatgaaaacagaggcttacgcatttcttatatgggagaaaat
gttgcagaggctgtagaggacgagaaacagatatctaaacaagaaattaataaaaagatt
ttggatttattagagactgaaaaaaatttagatactttatggtcatatacagacgagcag
gaagaatctttaatagcaaaacacagacaaactcactatgaatttactaaaataagggaa
tgtgaaataatgaaaaatggatctttcatatcctgtgataaagagattgtaattaaaaga
aagaattcatttaattcacagcttgaagacaattcgtcagatcataaatacaaagttcat
gtacaaagtattgttaacctgtttaccacagaagtattagataattacaacaccttgcaa
ctaataaaacagaaatcaaataattccaaattcacatatcacccgagtaataacctcttt
agttttgattttcaaccagaattagaaaatcatccaggaccaagtcccagtttaatcttg
caagctttaacgatgtccaatgcaaatgacggcattaatttagaacgattagaaactatt
ggagattcttttttaaaatatgctataactacttatttgtattgtacttatgataatata
cacgaagggaaactgagtcatttaagatccaaacaggtgagcaatttgaatttatacaga
ctaggaagacaaaaaatgttaggcgagagtatgatagcaacaaaatttgaaccccatgat
aactggttaccaccttgttactatgttccaaaggaacttgaacaagcactaattgaatct
ggtataccttctaccttatggaaccaagccgacattccaactttgcaagctgtaaatcca
aacgaaatcactcagcttgttagagaaacagaacaaaaattgggtatcatgaaagatgaa
ctcattcggaatgaagctatgctttcaaacagtctggataacttgcgttgtttcataccg
tacaatttgattactcaacatagcattcctgataaaagtatcgcagattgtgtcgaggca
ttaattggagcctacttgattgcctgtggtcctagaggtgcattattgtttatggcttgg
ttagggattcatgtattacctgtggaggaagttggcattgtacaagaaactgaaccagaa
gaaagaattcctggtagtacgccatatgtaaaaggaacgaatgagaagggtgaaacaacg
tgggcacagattcgttacggaaaattggaagaaccacagaatcccttacttcgatacatc
cctgatccagaacaagagttgcaaatgatgctcgatggatatgaagaattagaaaaaagt
ataggatataaatttaacgatattagttacttgttgcaagcatttactcatgcatcatat
caacctaataaattgacagactgttatcaacggttagaatttcttggagatgcagtttta
gattatttaataacaaggcatttatatgaagatgctcgacaacattctccaggtgctttg
acagatctacgatcagctttagttaataatactatattcgcttctctagcagttagatgt
ggatttcacaaatattttcgacatctatctccgggcttaagcgttgttataaatcgtttt
gttagaattcaggaagaaaacggacattccattagtgaggagtattatttaattggagaa
gaaaaatgcgaagaggcagaagatgtagaagtaccaaaggcattgggtgatgtttttgaa
tcactagctggtgcaatttatttagacagtggaatgtctttggatgcggtatggagtgta
tattatgtcatcatgaaaaatgaaattgaacaattcagtactaatgttcctaaatctcca
attcgtgaattattggaattagagcccgaaacggctaaatttggcaagccagaaaaattg
gccgacggacgtagggttagagttacagtagacgtttttggcaaaggatccttcaaagga
atcggaaggaattacagaatcgcaaaatgtactgcagcgaaatgtgctctgaagaaatta
aaacaaatgcaaaattatccgagagataaagaccgcatctcagaattgaaacacgagaaa
tctcgtgagcggttgtttaagtgttaa
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integrated database retrieval system
