KEGG   Osmia lignaria (orchard mason bee): 117607451
Entry
117607451         CDS       T09775                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
olg  Osmia lignaria (orchard mason bee)
Pathway
olg03020  RNA polymerase
olg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:olg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117607451
  09124 Replication and repair
   03420 Nucleotide excision repair
    117607451
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:olg03021]
    117607451
   03400 DNA repair and recombination proteins [BR:olg03400]
    117607451
Transcription machinery [BR:olg03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     117607451
DNA repair and recombination proteins [BR:olg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      117607451
SSDB
Motif
Pfam: Zn_ribbon_TFIIS Zn_ribbon_RPB9 Zn_ribbon_recom Ogr_Delta DUF4892 SR1P Zn_Ribbon_TF DZR
Other DBs
NCBI-GeneID: 117607451
NCBI-ProteinID: XP_034187048
LinkDB
Position
Unknown
AA seq 130 aa
MSKVAGYDTHDDGPGFVGIRFCQECNNMLYPKEDKENKVLMYACRNCDFKQLADSNCIYV
NKIMHEIDELTHIVADVISDPTLPRTEEHPCPKCNHREAVFFQAQTRRAEEEMRLYYVCT
NQHCTHRWTE
NT seq 393 nt   +upstreamnt  +downstreamnt
atgtcgaaagtagctggatatgatacacacgatgacggaccaggtttcgtcggtattaga
ttttgccaagaatgtaacaacatgttatatccaaaagaagataaagaaaacaaagtacta
atgtatgcgtgtagaaattgtgattttaagcaattggcagacagtaattgtatttatgtg
aacaaaattatgcacgagattgatgaattgactcatattgtggcagatgttatatcagat
cctactttaccaagaacagaggaacatccgtgtccaaaatgtaatcatagggaagcagta
tttttccaagcacaaaccaggagagcagaagaagaaatgagattatattatgtgtgtact
aatcagcattgtacccacagatggacggaataa

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