Osmia lignaria (orchard mason bee): 117607658
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Entry
117607658 CDS
T09775
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
olg
Osmia lignaria (orchard mason bee)
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
olg03041
]
117607658
Enzymes [BR:
olg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117607658
Spliceosome [BR:
olg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117607658
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
ResIII
CMS1
KH_NusA_2nd
KH_KhpA-B
MOEP19
KH_2
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_DEAH11_2nd
DUF1442
Motif
Other DBs
NCBI-GeneID:
117607658
NCBI-ProteinID:
XP_034187499
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MDNYQRTYTVSNNKYMKRGNQERYHRNNYRNEENQYNNSRYSNSDCESEKFIIHINSDKV
GKLIGRSGANIKDLQSKTNTKIHIDRSTGNDTTAVTIIGSKEAQQHAQNEIEDLLKDSSY
VSTEAKNEQTEQFEQEDKPPIDFTTFDWTKAGEECDAYRKEKWSKFAPVIKNFYKEHPEV
ANMTKEQVAHIRQTNNNIEVRYMFENEEKCSESSKDFPIPNPIETFEQAFEDYPEILEEI
RKQGFAKPSPIQCQAWPVLLSGKDLIGIAQTGTGKTLAFLLPALIHIEGQETPRSERTGP
NILVMAPTRELALQIEKEVNKYSYHGIKAVCIYGGGSRKEQVNIVTKGVEIVIATPGRLN
DLVEANILNISSVTYLVLDEADRMLDMGFEPQIRKTLLDIRPDRQTVMTSATWPQGVRRL
AQSYMQNPIQVFVGSLDLATVHTVMQKIYIVDEEEKSDRMYQFFREMATTDKVIVFFGKK
CRVDDIASDLALQGVNCQSIHGGREQCDREQALEDLKTGEVQILLATDVASRGIDIEDVT
HVLNYDFPRDIEEYVHRVGRTGRAGRTGESITFMTRKDWALAKELITLLEEANQEIPEEL
FKMAERFEARRDKRDFPQRRGGNRRY
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggataattatcaacgaacatatactgtctcaaacaataaatatatgaaacgtggtaat
caagaaagatatcacagaaataattacagaaatgaagagaatcagtataataattccaga
tatagcaattctgactgtgaatctgagaagtttattatacacattaacagtgataaagtg
ggaaaactgattggtagaagtggagctaacattaaagatcttcaaagcaaaacaaataca
aaaattcatattgatagatcaactggtaatgatactactgctgtaactataattggttcc
aaagaagcacaacagcatgctcagaatgaaatagaagatttattgaaagattcttcatac
gtatcgacagaagcgaagaatgagcaaacagagcaatttgagcaagaggataaaccacca
attgattttacaacatttgattggaccaaagctggtgaagaatgtgatgcatatagaaaa
gaaaaatggtcaaagtttgcacctgttatcaagaatttttataaagagcatccagaggtt
gctaatatgacaaaagaacaggtagctcatattaggcaaacaaacaacaatatagaagta
agatatatgtttgaaaatgaagaaaaatgttcagagagttcaaaagattttcccataccc
aatcctattgaaacatttgaacaagcttttgaggattatcctgagatactggaggaaata
agaaagcaaggatttgctaaaccaagtccaatacagtgtcaagcttggcctgttctcctt
agcggtaaagaccttattggaattgcgcaaacaggcacaggtaaaacactggcatttttg
ttgcctgctttaattcatatcgaaggacaagaaacaccaaggtcagagagaactgggcct
aatattcttgttatggcacccaccagagaattagcattacagattgaaaaagaagtgaat
aaatattcttatcacggtataaaagcggtatgcatctatggaggtggcagccgtaaagaa
caagtcaatatagtaactaaaggtgtagaaatagtcattgcgactcctggtagactaaat
gatcttgtagaagcaaatattttaaatatttcttcggtcacgtaccttgtattagacgaa
gccgatcgcatgcttgacatgggatttgaaccacaaattaggaagactttgttagatata
agaccagatcggcaaacagttatgacgagtgctacgtggcctcaaggtgttagacgttta
gctcaatcgtatatgcaaaatccgattcaagtatttgtcgggtctctcgatttagctact
gtacatacagtaatgcagaaaatttatatagtcgatgaagaagaaaaatcagataggatg
tatcaatttttccgtgagatggccaccaccgataaggtaatagtattttttgggaaaaaa
tgccgagtagatgacattgcgagtgatttagctcttcaaggtgttaactgtcaaagtata
catggaggaagggagcagtgtgatagagaacaagcattagaagatttaaaaactggcgaa
gtacaaatacttcttgcaacggatgttgccagtcgtggcatcgatattgaagatgttacg
catgtattaaattatgattttccgcgagatattgaagaatacgttcaccgagttggtcga
acgggtcgcgctggacgcactggagaaagtattacatttatgacaaggaaagattgggct
cttgcgaaggaattaattactcttctagaagaagctaatcaagaaattcctgaggaactg
tttaagatggctgaaagatttgaagcccgaagagataaacgagattttccacagagaagg
ggtggcaacagaagatattga
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