Osmia lignaria (orchard mason bee): 117607753
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Entry
117607753 CDS
T09775
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
olg
Osmia lignaria (orchard mason bee)
Pathway
olg03440
Homologous recombination
olg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117607753
03450 Non-homologous end-joining
117607753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
olg03032
]
117607753
03400 DNA repair and recombination proteins [BR:
olg03400
]
117607753
DNA replication proteins [BR:
olg03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
117607753
DNA repair and recombination proteins [BR:
olg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
117607753
BRCA1-C complex
117607753
NHEJ (non-homologous end-joining)
MRX complex
117607753
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SMC_N
AAA_21
SbcC_Walker_B
AAA_29
ATG17_like
AAA_5
AAA_16
ABC_tran
AAA_13
AAA_22
Motif
Other DBs
NCBI-GeneID:
117607753
NCBI-ProteinID:
XP_034187721
LinkDB
All DBs
Position
Unknown
AA seq
1380 aa
AA seq
DB search
MSRIRRLSIRGIRNFGDESEESEIRFSRPLTLILGPNGTGKTTIIEALKFATCGEFPPGS
DRGKFFIHDPALTTTSSVRGVIKAEISDAVGNVFTICRTIEYSKSNTSMKFKTLDTALSR
ISKITKEVVSITNRCTNVDTELTLAMGVSKPILDYVIFCHQEDLNWPFQDGKKLKEKFDE
IFDSARYNKALENIMKYIKDLRQRIIILKGQKENCSYIVKELEDKETKLEDHKKRVKNIK
IKIEEINEDLEPMSQKLNEMEQLESDYKDLLSEEKRKKAEYQMSKEQSQRLQKNISQLFK
GSLEKLEEEYKSYDTNLKKKADEIKELETSLKGIVKEESSISKLLADERVTNGSLKQQIK
EQERKIASRNKLLNEALSAWDLENVDSDVSEIEVIALSKRLHEKLRELNSKLGENKLQRE
EKEKEIQKEVDTLRSEYLTIDSQKNVKEKELIETREELNKVKTEMSQIGAAANKLNSIES
KLENVKRKIQELNEVMDVDAAKEEVLDKTKLRNEMEIRLNAIDEDIASLLKQSSLQAELE
LNKSALLSKEKEIEKLKEKHEQKLMKLLNVTKLPESKLKNKLDTVQKQLMDEIEKINQEI
QKAEHQSTTSETTITHMNHELQKKKKEMESDKLKIATICYYKNFDDVLLMQSRKVKDLQD
KRGIYAHQGAAYKEYMRQLKETNPCCPLCHRDFDKREAVVALLKDMEKEMESYPSRLKEC
EIELRTEQEKYDKMLQLKPVVENIVRLEETELETMKSNIETYENKLIHSQTFVIELKEKK
SEPENKLAMYNEIMSDIMLWDNYIDEIYKLKQIINNIQKRMTDAGIQTKYSLEEAQAKRE
ELKASLKNLSKEIETLQTKINTHGEKINNAREEQNTLHAEKLKIESNMQKLKQLKDKREE
LFSKEISLGSLLDQLRKKVAAAESELNAAVHELEKSKKENWEKLENDRKLSTEADRRLAD
LTKAQEETDLFIYRKIPKSIESSESKITKYQKSIDELLEKKNDIESRVNKLKQDINCQEI
RKRELYDNILLLKNQEVTKKLEKECSIIEVKLSNIHYPRIVEERKQLQNREQTLLRQKNM
IKGNQEELERAVKECTEELRKDIYRQARKNYKTKCIELTVLEETIINLNEYSKVLDAAMI
EYHEERMATVNRIIKEMWRLVYTGTDTTSIEIRTDATEGIGSGKRTYNYKLVQTKHGHEI
DMKGRCSAGQKVLASIIIRLALAETFCKNCGVLALDEPTTNLDQENADSLASALAMVVKL
RSQHQKNFQLIVISHDEKFLLKLAELNNNKGFHELYRKYNGYTAIRHCQVQNRDHAISSV
IKEEESSDEDADESSAQIKDNSQSGTGLHEKGALQKRKRNIDNEDNNERFSKKRYVLNLT
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgaataagaaggctttctattcgaggtattcgtaactttggcgacgaatccgaa
gaatctgaaattcgtttttctcgaccattgactcttattcttggtccaaatggtactgga
aaaacaacaattatcgaagcacttaaatttgctacttgcggtgaatttccacccggttca
gatcgaggaaaattctttattcatgatccagctttgactacaacttcgtcggttcgaggt
gttatcaaagctgaaatcagtgatgcagtaggcaatgtttttacaatatgtcgaacaata
gagtattcaaaatcaaatacatcaatgaaattcaaaactcttgatactgctctaagtaga
ataagtaaaataacaaaagaggtggtatcgataaccaatcgatgtaccaatgtggataca
gaactcacattagcaatgggagtttctaaacctattttagattatgtgatcttttgtcat
caagaagatcttaattggccttttcaagatggtaaaaaactgaaagaaaaatttgatgag
atttttgacagtgccagatacaacaaagctcttgaaaatatcatgaaatatatcaaagac
ttaaggcaaagaataattatattaaaaggacagaaagaaaattgctcatatattgttaaa
gaattagaggataaagaaacaaaacttgaagatcataaaaaacgagtgaaaaatattaaa
ataaaaatagaggaaatcaatgaagatttggaaccgatgagtcagaaacttaacgaaatg
gaacaactggaatctgattataaggatttgctatctgaagaaaaaaggaaaaaagcagag
tatcaaatgtccaaagaacagtctcagagattgcagaaaaatatatcacagctatttaaa
ggatcgctagagaagctagaagaggaatacaaatcttatgatacaaacttaaaaaaaaaa
gctgatgaaataaaagagcttgagacaagtttaaaaggtattgttaaagaagagtctagc
atatcaaaattgttggctgatgaaagagtaaccaatggttctttgaagcaacaaattaag
gagcaggagagaaaaattgcttcacgcaacaagttattaaatgaggcattgtctgcttgg
gatcttgaaaatgttgattctgatgtatcagagatagaggtgatagctctttccaaaaga
ttacatgaaaagttgcgggagttaaatagtaaactaggggaaaacaaattacaaagagaa
gaaaaagagaaagagatacagaaagaagtagatactttacgtagtgaatatctaacaata
gattcacagaagaatgttaaagaaaaagaattgattgagacaagagaagaacttaataaa
gtaaaaacagagatgtcacagatcggtgcagcggcaaataagttaaattccattgaatcc
aagctagagaatgtaaaaagaaaaattcaggaattgaatgaagtgatggatgtagatgca
gcaaaggaagaagttcttgacaaaacaaaattacgaaatgaaatggaaatacgtttaaat
gcgatcgatgaagatatagcctcgctattaaaacaaagttcgttgcaggccgaattagaa
ttaaacaaatctgcattgctttccaaagaaaaagaaatagaaaaattgaaggaaaaacac
gaacaaaaattaatgaagctgttaaatgttacaaaattaccggaatctaaactaaaaaat
aaattagatacggttcaaaaacaattgatggatgaaatagaaaaaattaatcaagaaatt
cagaaagcagaacatcagtcaactacttcagaaacaacgataacgcatatgaatcatgaa
ctccaaaagaaaaagaaagaaatggagtcggataaattaaagatcgcaacaatatgctat
tacaaaaactttgacgacgttctgttaatgcagtcgagaaaagtgaaagatcttcaagac
aaaagaggaatatatgctcatcaaggagctgcttacaaagaatatatgagacaattaaaa
gaaacaaatccgtgttgtcctttgtgtcacagagattttgataaacgcgaggctgttgta
gctttattaaaagatatggaaaaggaaatggaaagttatccaagtcggttgaaagaatgc
gagatagaattaagaactgagcaagaaaaatatgataaaatgttacagttaaaacctgtg
gttgaaaatattgtacggctcgaagaaactgaattagagacaatgaagagtaacatagaa
acatatgaaaataaattgattcattctcaaacgtttgtaatagaattgaaggagaaaaag
tctgaacccgaaaataaactagcaatgtataacgaaatcatgagtgatatcatgctatgg
gacaattatattgatgaaatttataaactcaaacaaataattaataatattcaaaaacgc
atgactgatgcaggaattcagacaaaatatagcctcgaagaagctcaagctaaacgagaa
gagctaaaagcatcgttaaaaaacctctccaaagaaattgaaactctacaaactaaaata
aatacgcacggtgaaaaaattaataatgctcgagaagaacaaaatacgttacatgcggag
aagttgaaaatagaatccaatatgcaaaaattaaaacagttgaaagacaagcgagaagaa
ttgttttcaaaagaaatttctcttggaagtttactagatcaattaagaaaaaaagtggct
gcagcagaaagtgaattaaatgcggcagttcatgaattagagaagtcgaagaaagaaaat
tgggaaaaactagaaaatgatagaaaattatcaacagaagcagacaggcgtttggctgac
ttaaccaaagcacaagaggaaactgatttatttatttaccgtaaaatccccaagtctata
gagtcttctgaatcaaaaataacaaagtatcaaaagtcaattgacgaactgcttgaaaag
aaaaacgatatagaatcaagagtaaataaattgaagcaagatattaattgtcaagaaatc
cgcaagagagaattgtacgataacattctattactgaaaaatcaagaagttactaaaaaa
ttagaaaaagaatgttcaataatagaagtaaaactaagtaatatacattatcctcggata
gtagaagaacgaaagcaattgcaaaaccgggaacaaactttactccgtcagaaaaatatg
atcaaaggaaatcaagaagaattagaaagagcagtgaaagaatgcactgaagaactgagg
aaagatatttacagacaagctcgtaaaaattataaaacgaaatgcattgaattaacggta
ctagaagaaaccataataaacttaaacgaatatagtaaagtattagacgcggctatgatc
gaataccatgaagaacgtatggcaacggttaacagaatcattaaggaaatgtggaggctt
gtatatactgggacagataccacatccatagaaattcgcacagatgctacggaaggtata
ggcagtggaaaaagaacgtataactacaaactagttcaaaccaaacatggtcatgaaata
gatatgaaaggtcgctgcagcgctggtcaaaaagtcttagcatcgataattataaggcta
gctttagcagagaccttttgtaaaaattgcggagttctcgctctggatgaaccgacaacg
aacttggaccaggaaaatgcagatagtttagcaagtgctttagctatggttgttaaattg
cgatcacagcatcaaaagaatttccaattgattgtgatcagtcatgacgaaaagttttta
ttaaaactagccgaattaaacaataataaaggctttcatgaactttaccgtaaatataac
ggatatacggcaattagacattgtcaagtacaaaatcgagatcatgctatatcaagtgtc
ataaaagaagaagaatcatcagatgaagatgctgatgaatcttcagcacagataaaagat
aattcacagtcaggaacaggtttacatgagaaaggagcattgcaaaagagaaaaagaaat
atcgacaatgaggataataacgaacgcttctcaaaaaagagatacgttttaaatttaact
taa
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integrated database retrieval system