KEGG   Osmia lignaria (orchard mason bee): 117607753
Entry
117607753         CDS       T09775                                 
Name
(RefSeq) DNA repair protein RAD50
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
olg  Osmia lignaria (orchard mason bee)
Pathway
olg03440  Homologous recombination
olg03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:olg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    117607753
   03450 Non-homologous end-joining
    117607753
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:olg03032]
    117607753
   03400 DNA repair and recombination proteins [BR:olg03400]
    117607753
DNA replication proteins [BR:olg03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    117607753
DNA repair and recombination proteins [BR:olg03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     117607753
    BRCA1-C complex
     117607753
   NHEJ (non-homologous end-joining)
    MRX complex
     117607753
SSDB
Motif
Pfam: AAA_23 Rad50_zn_hook SMC_N AAA_21 SbcC_Walker_B AAA_29 ATG17_like AAA_5 AAA_16 ABC_tran AAA_13 AAA_22
Other DBs
NCBI-GeneID: 117607753
NCBI-ProteinID: XP_034187721
LinkDB
Position
Unknown
AA seq 1380 aa
MSRIRRLSIRGIRNFGDESEESEIRFSRPLTLILGPNGTGKTTIIEALKFATCGEFPPGS
DRGKFFIHDPALTTTSSVRGVIKAEISDAVGNVFTICRTIEYSKSNTSMKFKTLDTALSR
ISKITKEVVSITNRCTNVDTELTLAMGVSKPILDYVIFCHQEDLNWPFQDGKKLKEKFDE
IFDSARYNKALENIMKYIKDLRQRIIILKGQKENCSYIVKELEDKETKLEDHKKRVKNIK
IKIEEINEDLEPMSQKLNEMEQLESDYKDLLSEEKRKKAEYQMSKEQSQRLQKNISQLFK
GSLEKLEEEYKSYDTNLKKKADEIKELETSLKGIVKEESSISKLLADERVTNGSLKQQIK
EQERKIASRNKLLNEALSAWDLENVDSDVSEIEVIALSKRLHEKLRELNSKLGENKLQRE
EKEKEIQKEVDTLRSEYLTIDSQKNVKEKELIETREELNKVKTEMSQIGAAANKLNSIES
KLENVKRKIQELNEVMDVDAAKEEVLDKTKLRNEMEIRLNAIDEDIASLLKQSSLQAELE
LNKSALLSKEKEIEKLKEKHEQKLMKLLNVTKLPESKLKNKLDTVQKQLMDEIEKINQEI
QKAEHQSTTSETTITHMNHELQKKKKEMESDKLKIATICYYKNFDDVLLMQSRKVKDLQD
KRGIYAHQGAAYKEYMRQLKETNPCCPLCHRDFDKREAVVALLKDMEKEMESYPSRLKEC
EIELRTEQEKYDKMLQLKPVVENIVRLEETELETMKSNIETYENKLIHSQTFVIELKEKK
SEPENKLAMYNEIMSDIMLWDNYIDEIYKLKQIINNIQKRMTDAGIQTKYSLEEAQAKRE
ELKASLKNLSKEIETLQTKINTHGEKINNAREEQNTLHAEKLKIESNMQKLKQLKDKREE
LFSKEISLGSLLDQLRKKVAAAESELNAAVHELEKSKKENWEKLENDRKLSTEADRRLAD
LTKAQEETDLFIYRKIPKSIESSESKITKYQKSIDELLEKKNDIESRVNKLKQDINCQEI
RKRELYDNILLLKNQEVTKKLEKECSIIEVKLSNIHYPRIVEERKQLQNREQTLLRQKNM
IKGNQEELERAVKECTEELRKDIYRQARKNYKTKCIELTVLEETIINLNEYSKVLDAAMI
EYHEERMATVNRIIKEMWRLVYTGTDTTSIEIRTDATEGIGSGKRTYNYKLVQTKHGHEI
DMKGRCSAGQKVLASIIIRLALAETFCKNCGVLALDEPTTNLDQENADSLASALAMVVKL
RSQHQKNFQLIVISHDEKFLLKLAELNNNKGFHELYRKYNGYTAIRHCQVQNRDHAISSV
IKEEESSDEDADESSAQIKDNSQSGTGLHEKGALQKRKRNIDNEDNNERFSKKRYVLNLT
NT seq 4143 nt   +upstreamnt  +downstreamnt
atgtcacgaataagaaggctttctattcgaggtattcgtaactttggcgacgaatccgaa
gaatctgaaattcgtttttctcgaccattgactcttattcttggtccaaatggtactgga
aaaacaacaattatcgaagcacttaaatttgctacttgcggtgaatttccacccggttca
gatcgaggaaaattctttattcatgatccagctttgactacaacttcgtcggttcgaggt
gttatcaaagctgaaatcagtgatgcagtaggcaatgtttttacaatatgtcgaacaata
gagtattcaaaatcaaatacatcaatgaaattcaaaactcttgatactgctctaagtaga
ataagtaaaataacaaaagaggtggtatcgataaccaatcgatgtaccaatgtggataca
gaactcacattagcaatgggagtttctaaacctattttagattatgtgatcttttgtcat
caagaagatcttaattggccttttcaagatggtaaaaaactgaaagaaaaatttgatgag
atttttgacagtgccagatacaacaaagctcttgaaaatatcatgaaatatatcaaagac
ttaaggcaaagaataattatattaaaaggacagaaagaaaattgctcatatattgttaaa
gaattagaggataaagaaacaaaacttgaagatcataaaaaacgagtgaaaaatattaaa
ataaaaatagaggaaatcaatgaagatttggaaccgatgagtcagaaacttaacgaaatg
gaacaactggaatctgattataaggatttgctatctgaagaaaaaaggaaaaaagcagag
tatcaaatgtccaaagaacagtctcagagattgcagaaaaatatatcacagctatttaaa
ggatcgctagagaagctagaagaggaatacaaatcttatgatacaaacttaaaaaaaaaa
gctgatgaaataaaagagcttgagacaagtttaaaaggtattgttaaagaagagtctagc
atatcaaaattgttggctgatgaaagagtaaccaatggttctttgaagcaacaaattaag
gagcaggagagaaaaattgcttcacgcaacaagttattaaatgaggcattgtctgcttgg
gatcttgaaaatgttgattctgatgtatcagagatagaggtgatagctctttccaaaaga
ttacatgaaaagttgcgggagttaaatagtaaactaggggaaaacaaattacaaagagaa
gaaaaagagaaagagatacagaaagaagtagatactttacgtagtgaatatctaacaata
gattcacagaagaatgttaaagaaaaagaattgattgagacaagagaagaacttaataaa
gtaaaaacagagatgtcacagatcggtgcagcggcaaataagttaaattccattgaatcc
aagctagagaatgtaaaaagaaaaattcaggaattgaatgaagtgatggatgtagatgca
gcaaaggaagaagttcttgacaaaacaaaattacgaaatgaaatggaaatacgtttaaat
gcgatcgatgaagatatagcctcgctattaaaacaaagttcgttgcaggccgaattagaa
ttaaacaaatctgcattgctttccaaagaaaaagaaatagaaaaattgaaggaaaaacac
gaacaaaaattaatgaagctgttaaatgttacaaaattaccggaatctaaactaaaaaat
aaattagatacggttcaaaaacaattgatggatgaaatagaaaaaattaatcaagaaatt
cagaaagcagaacatcagtcaactacttcagaaacaacgataacgcatatgaatcatgaa
ctccaaaagaaaaagaaagaaatggagtcggataaattaaagatcgcaacaatatgctat
tacaaaaactttgacgacgttctgttaatgcagtcgagaaaagtgaaagatcttcaagac
aaaagaggaatatatgctcatcaaggagctgcttacaaagaatatatgagacaattaaaa
gaaacaaatccgtgttgtcctttgtgtcacagagattttgataaacgcgaggctgttgta
gctttattaaaagatatggaaaaggaaatggaaagttatccaagtcggttgaaagaatgc
gagatagaattaagaactgagcaagaaaaatatgataaaatgttacagttaaaacctgtg
gttgaaaatattgtacggctcgaagaaactgaattagagacaatgaagagtaacatagaa
acatatgaaaataaattgattcattctcaaacgtttgtaatagaattgaaggagaaaaag
tctgaacccgaaaataaactagcaatgtataacgaaatcatgagtgatatcatgctatgg
gacaattatattgatgaaatttataaactcaaacaaataattaataatattcaaaaacgc
atgactgatgcaggaattcagacaaaatatagcctcgaagaagctcaagctaaacgagaa
gagctaaaagcatcgttaaaaaacctctccaaagaaattgaaactctacaaactaaaata
aatacgcacggtgaaaaaattaataatgctcgagaagaacaaaatacgttacatgcggag
aagttgaaaatagaatccaatatgcaaaaattaaaacagttgaaagacaagcgagaagaa
ttgttttcaaaagaaatttctcttggaagtttactagatcaattaagaaaaaaagtggct
gcagcagaaagtgaattaaatgcggcagttcatgaattagagaagtcgaagaaagaaaat
tgggaaaaactagaaaatgatagaaaattatcaacagaagcagacaggcgtttggctgac
ttaaccaaagcacaagaggaaactgatttatttatttaccgtaaaatccccaagtctata
gagtcttctgaatcaaaaataacaaagtatcaaaagtcaattgacgaactgcttgaaaag
aaaaacgatatagaatcaagagtaaataaattgaagcaagatattaattgtcaagaaatc
cgcaagagagaattgtacgataacattctattactgaaaaatcaagaagttactaaaaaa
ttagaaaaagaatgttcaataatagaagtaaaactaagtaatatacattatcctcggata
gtagaagaacgaaagcaattgcaaaaccgggaacaaactttactccgtcagaaaaatatg
atcaaaggaaatcaagaagaattagaaagagcagtgaaagaatgcactgaagaactgagg
aaagatatttacagacaagctcgtaaaaattataaaacgaaatgcattgaattaacggta
ctagaagaaaccataataaacttaaacgaatatagtaaagtattagacgcggctatgatc
gaataccatgaagaacgtatggcaacggttaacagaatcattaaggaaatgtggaggctt
gtatatactgggacagataccacatccatagaaattcgcacagatgctacggaaggtata
ggcagtggaaaaagaacgtataactacaaactagttcaaaccaaacatggtcatgaaata
gatatgaaaggtcgctgcagcgctggtcaaaaagtcttagcatcgataattataaggcta
gctttagcagagaccttttgtaaaaattgcggagttctcgctctggatgaaccgacaacg
aacttggaccaggaaaatgcagatagtttagcaagtgctttagctatggttgttaaattg
cgatcacagcatcaaaagaatttccaattgattgtgatcagtcatgacgaaaagttttta
ttaaaactagccgaattaaacaataataaaggctttcatgaactttaccgtaaatataac
ggatatacggcaattagacattgtcaagtacaaaatcgagatcatgctatatcaagtgtc
ataaaagaagaagaatcatcagatgaagatgctgatgaatcttcagcacagataaaagat
aattcacagtcaggaacaggtttacatgagaaaggagcattgcaaaagagaaaaagaaat
atcgacaatgaggataataacgaacgcttctcaaaaaagagatacgttttaaatttaact
taa

DBGET integrated database retrieval system