Osmia lignaria (orchard mason bee): 117607918
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Entry
117607918 CDS
T09775
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
olg
Osmia lignaria (orchard mason bee)
Pathway
olg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117607918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
olg03041
]
117607918
03009 Ribosome biogenesis [BR:
olg03009
]
117607918
Enzymes [BR:
olg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117607918
Spliceosome [BR:
olg03041
]
Complex A
U1 snRNP components
U1 related factors
117607918
Complex B
117607918
Ribosome biogenesis [BR:
olg03009
]
Eukaryotic type
Pre-60S particles
Helicases
117607918
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
TFIIA
Motif
Other DBs
NCBI-GeneID:
117607918
NCBI-ProteinID:
XP_034188060
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MYNNSYSNHTSLSTAFSENSYRPRGNRDSNSRNGSGTFWNSQQHTQKEKTLKKQAQRRTP
GDSLKKPSWDLAKLPVIAKNLYIPHINVLKRSIDEVTKYHIGKEITVKGNNTPSPIQAFE
ESNFPDYVMKEIRKQGFAEPTAIQAQGWPIALSGRDLVGIAQTGSGKTLAYILPATVHIN
SQPQLSRGDGPIVLILAPTRELAQQIQSVARDFGSSSCIRNTCIFGGSPKGPQARDLERG
VEICIATPGRLIDFLEKGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLM
WSATWPKEVQALAEDFLTDYIQINIGSLTLAANHNIRQIIEICQEHEKESKLSGLLREIG
KDRGGKMIIFVETKKKVDDITKAIKREGWSAISIHGDKSQPERDYVLSEFRNGKTMILVA
TDVAARGLDVEDVKYVINFDYPNSSEDYIHRIGRTGRCQSAGTAYAYFTPNNARQAKELI
SVLEEAGQVINPQLADLANSMKNSYGKGRQRWSHSRSNKDNNPGSPRNNSSPTNNWQNQH
SQSIQHNGVNGQERTVARQQNGYQNSRQNSFQPNYQQQQQQQQQQQQQQQHQRQPNAYTT
SCQTSSSYQTGYQNANIPRYHGRTGSFQGNRYHNRQNTYSTNQTAGGQNVYSMPPPFMMP
SGGHTDSGMQSLVNNKFFQTNRPPPNTGACAYQSMGYGQFQAVPPYSYPYPPTPVQQ
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtataacaacagttattccaatcataccagtttgtcaacagcattttctgaaaacagt
tacagacctagggggaacagagactctaacagtcgtaatgggagtggaacattctggaat
agtcaacaacacacacagaaggagaagacgcttaagaagcaagctcagaggagaacacct
ggagattcattgaagaagcctagttgggatttagccaaattacccgtgatcgctaagaat
ttatatatcccacatatcaacgtcctgaaacgttcgatcgatgaggtcaccaaatatcac
attggcaaagaaatcacagtaaaaggaaataacaccccgtctccgattcaagcattcgaa
gaaagtaacttcccggattacgtaatgaaagaaattagaaaacaaggatttgctgaacca
actgctattcaagcacagggttggccaattgcgcttagtggacgtgatttagttggaatt
gctcaaacaggatctggaaaaacgttagcttatattttaccagcgacggtacacatcaat
agtcaaccacaattgagccgaggagacggtccgattgttttaattcttgctccaacgagg
gagttggctcagcaaattcaatccgtcgccagggacttcggatcatcttcgtgtatccgt
aatacttgtatcttcggtggttctccaaaagggcctcaggctcgcgacttagaacgtggc
gttgaaatatgcatcgccactcccggcagactgatcgattttctcgagaagggaacgacg
aatctgcgcaggtgcacgtaccttgtactcgatgaggcggatagaatgttggacatggga
ttcgagccgcagattcgtaaaatcatcgaacaaataagacccgacaggcaggtgctaatg
tggtccgcaacgtggcccaaggaagtgcaggctctagctgaagactttctgacagactac
attcagataaacattggttctctgacattggctgctaaccacaacatacgtcagataatc
gagatttgccaggaacacgagaaggaatcgaagctttcgggtttgctacgagaaattggc
aaagaccgaggaggcaaaatgatcattttcgttgaaacgaagaagaaagtagacgacata
actaaagctattaaacgggagggttggtcggccatctctattcacggcgataagtctcaa
cctgaaagggattacgttctgtccgagttcaggaacggaaaaacgatgatacttgtcgct
accgacgtggctgctcgcggtttggacgtggaggacgtgaaatacgtgatcaacttcgat
taccctaacagctctgaggattacattcacagaataggaaggaccggacgttgtcaaagt
gctggcaccgcgtatgcgtacttcacacctaacaacgcaagacaagcgaaagaattgatc
tcagttctagaggaagctggccaagtgataaacccgcaattagcagatctggcaaactcg
atgaagaattcctacggcaagggtcgccaacgctggagtcactctcgctccaacaaagat
aacaatcctggaagcccgcgaaacaatagtagcccgacgaataattggcaaaatcaacat
tctcaaagtattcaacacaacggcgttaacggccaagaaagaaccgttgcgcgccaacag
aatggataccagaacagtcgtcagaatagttttcagcctaactaccaacaacagcagcag
cagcaacaacaacagcagcaacaacagcaacaccagagacagcctaatgcttataccacc
agttgtcagactagtagcagctaccaaactggttatcagaatgcaaatatacctagatac
cacgggaggacgggaagttttcaagggaaccgttaccacaaccgtcagaacacctacagt
accaaccaaacagctgggggacagaacgtatactctatgccacctccgttcatgatgcca
tccggtggtcataccgactctgggatgcaaagccttgttaataacaaattcttccagaca
aatcggccaccgccaaacactggagcctgcgcttatcaatcgatgggatacggtcagttc
caagctgtgccaccgtatagttacccttatccgcccactccagtgcagcagtga
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