Osmia lignaria (orchard mason bee): 117608003
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Entry
117608003 CDS
T09775
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
olg
Osmia lignaria (orchard mason bee)
Pathway
olg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117608003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olg03019
]
117608003
03012 Translation factors [BR:
olg03012
]
117608003
Enzymes [BR:
olg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117608003
Messenger RNA biogenesis [BR:
olg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117608003
Translation factors [BR:
olg03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
117608003
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_N
HA2_C
nSTAND3
AAA_22
AAA_19
AAA_14
ResIII
RsgA_GTPase
ATPase
PhoH
NB-ARC
ATPase_2
NPHP3_N
ABC_tran
NACHT
AAA_16
AAA_23
baeRF_family3
TsaE
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
117608003
NCBI-ProteinID:
XP_034188287
LinkDB
All DBs
Position
Unknown
AA seq
981 aa
AA seq
DB search
MSHPYGSVSAQGNYARRSKHGSKVDSSQSESSRTEHHGASRSTGQRHPPWLKGKDIGLYY
RDKAINKAKQKQQSICNIKLPSHVQDKIENLLERSKGYYDKLHNNEACTEDTNTALENKY
VHIHDSQFKRKFLNIVSGNIQENLAKALLVKSKLDKDNDIDEKLINEYKAKQSLQEYENM
MKFRTKLPSYQKRSEILELLRENQVVVISGETGCGKTTQIAQFILDDQIEQGNGSVTKII
CTQPRRISAISVAERVAAERAEKLGRSVGFHIRLEKVLPRDRGSILFCTTGLLLQFMQGD
PALKEFSHIILDEIHERSTDSDFIIALLKLIIPKRPDLKVILMSATLNSDTFSKYYNGCP
IIHIPGFTYPVEEFYLEDVLSLTRFKFPEAQLPPQDHRKHSKKYKKMQETTDEFFRIIDP
HIRRLIAQKTFPRHVTDQLRNPESEKLSLELTEQLIRYICSTKGPGAILVFLPGMMDIIK
LHRMLLDSVRYPDSQYVIYPLHSLMPTIDQKLIFKEPPEGVRKIIIATSIAESSITIEDI
VYVIDCGKTKFGKFDIEKNVQTLEPEWISLANAKQRRGRAGRVRPGFCYHLYSKAREMTF
EQYPLPEMLRTRLEEVILRIKILQLGKARSFLDSVMNPPNWEAIDLSLNLLRTLNALDND
ENLTPLGYHLAQLPVDPRTGKMIIWAALFSCVEPVFAIAASLSFKHAFYCPLGKEAEAKQ
KKLELNKEQYSDHIALAEALTRFESSYRRGNAGYFCRNYFLSFSTLKLLSEMKSQFAQHL
YEMKFLNSQNPSDPNANRNSHNITLVKAIVCAALYPNVAVIRDVTKNGTLAWTPEDGRVT
IHPSSVNDKVKQVPSQFITYFTKQRSTAVYLHDTTCVTVPILIFAAPNICIKVEKGNFVI
TLPSFQTFPCDQRTAQLIQKLQDQFNNMLEYKITHPGTVTWNNYEGDLLNAIIDVVCQTN
ESMGFSKSNVQEQRNNTYDDV
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatccttacggatcagtttcagcacaaggaaattatgcacgtcgcagcaaacat
gggagcaaagttgatagttctcaatctgaaagttcacgcactgaacatcatggtgcttca
agaagcacagggcaaagacatcctccatggttaaagggaaaagatataggattatattac
agagacaaagccattaacaaagctaaacaaaagcaacaatccatctgcaacattaagctt
ccatcgcatgttcaagataaaattgaaaatttgttagaaagatctaaagggtattatgat
aaactacataacaatgaagcttgtacagaagataccaatactgcattggagaataaatat
gttcatattcatgattcccagtttaagagaaagtttttaaatatagtgtctggtaatata
caagagaatcttgccaaagctttacttgttaaatcaaagttagacaaggataatgatata
gatgagaaattaataaatgaatataaggcaaaacagtctttgcaagaatatgagaatatg
atgaaatttcgaacgaaactgccatcatatcaaaaaagatcagaaatattagaattactt
agagaaaatcaagttgttgtaataagtggagagactggttgtggtaaaacaacacaaatt
gcccagtttatattggatgaccaaatagaacaaggcaatggtagtgttaccaaaatcatt
tgcactcaacctagaagaatatcagctatatctgttgctgaaagagttgctgctgaaaga
gcagaaaaacttggtagatctgtaggtttccacataaggcttgaaaaagtattacccaga
gatagaggaagtatattattttgtactactgggttattattacaattcatgcaaggtgat
ccagctttaaaagaattctctcatattattctggatgaaattcacgaacgttctacagat
agtgatttcattattgctctattaaaattaattattccaaagaggccggatttgaaagtt
attttaatgagcgcgacgcttaactcggacacattttcaaaatattataatggctgtcca
ataattcacattcccggttttacttacccagtggaagaattttatttagaggatgtttta
tcactcacaagatttaagtttcctgaagcacagcttccccctcaagatcataggaaacac
agtaaaaaatataaaaaaatgcaggagaccacagatgagtttttcagaatcatagatcca
cacatccgcagacttatagcacaaaaaacatttccaagacacgtgactgatcagttaaga
aacccagaaagtgagaaattatctcttgaacttacagaacaattgattaggtatatctgt
agtacaaaaggtccaggagctattttagtttttcttcctggtatgatggatataataaaa
ttacacaggatgttgttagatagtgtacgatatcctgatagtcaatatgttatttatcct
cttcactctcttatgccaacaattgatcaaaaactcatattcaaagaaccacccgaaggg
gttcgaaaaataattatcgctacttctatcgctgaaagttctataactatcgaagatata
gtatatgtcattgattgtggaaaaacgaaatttggaaagtttgatatagagaagaatgta
caaactttagaacctgagtggatatccttggcaaatgcgaaacaaagaagaggtagagca
ggcagagtaagacctggtttttgttatcatttgtattcgaaagctagagaaatgacgttt
gaacagtatccattaccggaaatgttaagaacacgattagaggaagttattttacgtata
aaaattttacaattaggaaaggctagatctttcctagacagtgttatgaaccctccaaac
tgggaagctatagatttatctttaaatttactcaggaccctgaatgcattagataatgac
gaaaatttaacacctttagggtatcatttggcacaactgccagttgatccacgaacagga
aaaatgatcatatgggcagcattattttcatgtgtcgaaccagtatttgcaatcgcagcg
agtctaagtttcaaacacgcattttactgtcctctagggaaagaggcagaagcaaagcaa
aagaaacttgagcttaataaggagcaatatagcgatcacatagcattagccgaagcattg
acgagattcgaatcttcgtatagaaggggaaatgctggttatttttgtagaaattatttt
ctttcttttagtacgctgaaacttctttccgaaatgaaatcacaatttgctcaacatttg
tacgaaatgaaatttttgaacagtcaaaaccctagtgatccaaatgccaatagaaattct
cataacataactttggtaaaagcaatagtatgcgccgcattatacccaaatgttgctgta
atcagggatgtcacaaaaaatggaacgcttgcatggactccggaagatggtcgagttact
atacatccttctagtgtaaatgataaagtcaagcaagttcctagtcagtttattacatat
tttacgaaacagcgatcaactgcagtatatttacatgacactacatgtgttaccgttccg
attcttatatttgctgctccgaatatctgtataaaagtagaaaaaggaaatttcgttatc
actttgccaagttttcaaacttttccttgcgatcaacgaactgcacaactcattcagaaa
ctacaagatcagtttaataatatgttagaatataaaattacacatccaggaacagtaacc
tggaataattacgaaggcgacctactaaatgcgattatagatgtggtctgccaaacaaat
gagagtatgggattttccaaatctaatgttcaagaacagagaaataatacgtatgatgat
gtttga
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