Osmia lignaria (orchard mason bee): 117608317
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Entry
117608317 CDS
T09775
Name
(RefSeq) small RNA degrading nuclease 5 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
olg
Osmia lignaria (orchard mason bee)
Pathway
olg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117608317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
olg03009
]
117608317
Ribosome biogenesis [BR:
olg03009
]
Eukaryotic type
Pre-60S particles
RNases
117608317
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DUF4288
Motif
Other DBs
NCBI-GeneID:
117608317
NCBI-ProteinID:
XP_034189126
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MKNLTAKQLQRIEKKKKKMAALLEITKLNDKDREAKILALKTASTEIDLSNDIDNNEISM
EESYNRKRPCDEDLKGTCSGDSTEKEDGEITEELDPLANKKPRLSGEEYLKLKQELRERK
KRLKSIPRFHLKAVGENASISINVKSEDRIPIFLSDIQHLLLYSLHGHHSPYLPTRWCHL
EKYNRVSHTVALVIEGLSIYHFMAYESMFPSITSNLEHRVEVVTPMIYGGSVVEDLAAVP
ITGVHCDKLIEQYGSLQSALNSTRDVIKLLKTVFPMYQTEPTDIKRILELPYTDKFPRTQ
LLLSLCQMVEENYPIPLSGELAKKYGNYIMTKDVYLEATARSPMIGLDCEMCKTTMGELE
LTRITLVDEKMNVIYDSLVKPDNPITDYLTRFSGITKEMLEDVTTTLSDIQQVLRKLLPP
DAILVGQSLNSDLHTLKMMHPYIIDTSVIFNITGDRYRKTKLQTLVREFLGEKIQNSTDG
HCSAEDSRACMKLVQLKLANSVDYGDAVLLGRCDIEILKMETAKRSPTERSLKTEIRKYA
TSIFNHVTKDQKTAAVVGDEEVMNEYSTFLTPSIKIMDDENFDKNDQVRLVVADNNKQAV
TRASQIAMEHAFTLCHIRIKKEKLGDDRIEKTFNIVNKWVYKLWQHMAINGLACVIFAGE
NNAGNGVCFLNIKREVPENCVIRA
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatttaacagcaaaacaattacaaagaatagagaaaaagaaaaaaaagatggct
gcacttttagaaattaccaaattaaatgataaagacagagaagcaaaaatacttgctctt
aaaacagcatctacagagatagatctctctaatgatatagataacaatgaaatttctatg
gaagaaagctacaatcgtaaacgaccttgtgatgaagatttaaaagggacttgttccgga
gattctactgaaaaagaagacggagaaattacggaagaattagatccacttgccaataaa
aaacctagattaagtggagaagagtacctaaaactgaaacaagaattaagagaacgtaaa
aagagacttaaatcaattcctaggtttcatctgaaggcagttggcgagaacgctagtata
agtattaatgttaaaagtgaagataggattcctattttccttagcgatatacaacattta
ttattgtattcgttacatggtcatcattcaccttatttaccgacaagatggtgtcacctc
gaaaaatataatagggtttcacatacggtggctctagttatagaaggtctttctatatac
cattttatggcttacgaaagtatgtttccatctatcacatcaaatttggaacaccgtgtc
gaagtggtaacacctatgatatatgggggatcagtggtagaagatcttgcagcagttcct
ataactggggttcattgcgataaattaattgaacagtatgggtcattacagagtgcatta
aatagtactagagatgtaataaaattgttaaaaactgtcttcccgatgtatcaaacagaa
ccaacagatatcaaaagaatacttgaactaccttatactgataaatttcctagaacacaa
ttacttttatctttatgtcaaatggtggaagaaaattatcctattcctctaagtggtgaa
ctagcaaagaaatacggaaattacataatgacaaaagatgtatatctagaagctactgcg
agatctccgatgatcggtttagattgtgaaatgtgtaaaacaactatgggagagttggaa
ttaacaagaataacgttggttgatgaaaaaatgaatgttatttatgatagtctagtgaaa
ccggataatcctattacggattatctcactcgattcagtggtataacaaaagaaatgttg
gaagacgttactactacattatctgatattcaacaagttttacgaaagttacttcctccg
gatgctattcttgtcggacagagcttgaactctgatcttcatacattaaaaatgatgcac
ccctacattattgatacatctgtgatttttaatattaccggtgacagatatagaaaaaca
aaattacaaacactagtaagggaatttcttggcgaaaaaatacaaaatagcaccgatggt
cattgttcagccgaagattcaagagcttgtatgaaattagtccaattaaaattagcaaac
agcgtagattatggagacgctgtgttacttggtagatgtgatatcgaaatattaaagatg
gaaacagcaaaacgtagccctactgaacgatcgctcaaaactgaaatacggaaatatgct
acttcaatttttaatcatgtaacgaaagatcaaaaaactgctgctgttgtgggagatgag
gaagttatgaatgaatattccacatttttaacaccatccattaagattatggatgacgaa
aattttgataaaaacgatcaagttagacttgtagtagcagataataataagcaagccgta
actcgagcttcccaaatagcaatggaacatgcttttactttgtgtcacattagaataaag
aaggaaaaattaggggatgatcgaatagagaaaacgttcaatattgtaaataaatgggta
tataaattatggcaacatatggctataaacggactagcgtgtgttatattcgcgggtgaa
aataatgcaggaaatggcgtgtgtttcttgaatataaaaagagaagtacctgaaaactgc
gtaatacgcgcttga
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