Osmia lignaria (orchard mason bee): 117608326
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Entry
117608326 CDS
T09775
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
olg
Osmia lignaria (orchard mason bee)
Pathway
olg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117608326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
olg03009
]
117608326
Ribosome biogenesis [BR:
olg03009
]
Eukaryotic type
Pre-60S particles
RNases
117608326
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
117608326
NCBI-ProteinID:
XP_034189162
LinkDB
All DBs
Position
Unknown
AA seq
1317 aa
AA seq
DB search
MLPSTGYFKAIGCPFYESGSCDRPYCHFKHSKRVLEDVGVTAEATETVESGAVGQVQEAK
ACTMVSSGSDVLQKLVTEAVKKVLANQDATNADQFSCQNVVSQVVEGLTPTLTPGSSNTF
DTVATNTTENRVDASTSVSVSKAIPCVYNPTPIAELKKRHIPIVSYMPTRDSRVAVKRKC
SPDGIKAWLATSCESGESIETDCEIKYKPTVIVNSEIRDTTQSYIPTYKSDSAPAYFYKD
ESSNEYLFKLRESYYPKCKKRREEYVPKRVKTPLKTVEGLNESALEQFNRGFGTIDESLV
LSKSTSAIQSKELFQTSCMDLEAKFSDDDDDDDDDDNDDDDDGDEDDDVEEEEEDENNHE
NINKIDSENANCTSVEENELYRNVRRFDCLNGKRGHDAVIEEWSQVKVENECDEERNCNG
TVLRNSNVPKQVKLTSKEGGKPLLHEEKKVPKVDTDQVGSVNSKEFKSRDKNKEKDQKDC
DKSHKRYKVSKRDSYETSRSATHSKSKTKSHVEREKEKESRSTKSDKDKSSHKDRKKHRS
KERERERERERERERERESERGGSRHKTNKRDKGEDYHESEKCNERESKNCSDSSKRREH
IEKRNDESKRSKRNKKSDDKTSGKFRRHAKHREGRSSVDRSVSSLEGNTGWNPIDDDDDE
ENNDYNDNNMMSMDIDVTFSTSDSDHDVQEECLKIFQEYQVPERPKPMESSKELPLHEKE
ENEEIGRKRVAHPSAATCVTRQTGVNQQGKKVIHPQQKMYERWRLMRDAVVEKSISTVAE
GGSSGGGGGCSSSNNVIKDVRRNCVETAATTTCNSELKLNGGNGRVRIAHVPYAKSLAIE
KKKVRENAVVAAAAAAVSAIVATPVSSKLTESQKTAAQTAKSGVRIAHVPQVVPQLIRPE
PLQVATQKFPLNVRQYYVNMMHDVCVLIYTNAEDAAQRAVKEEHACHERCKALAVYKNSC
MLAAHRLRKEVDQNQSAENNAATTSGNIIVSHEAVLAGKAKGSWSVLKTKKSVTEFRGVA
LYGMLKKWIMTEQQLRDNGFPRPHPDGQKGRAKVYVINSRNQSVLSKVPNERVCCRCGQT
YMIDKQGFALQSQNCIYHWGRKFTIRGEGKYSCCQQYGSATGCCDAKTHVWDYTDYENLR
GYVKTLPKGTTIEEQGVYALDCEMCYTTQGLELTRITIIDEDCNVVYETLVKPQNPIIDY
NTRFSGITEESMKDVATTLLDVQATILTMFSEKTILVGHSLESDFKALRLLHETVVDTSV
MFPHKNGYPQKRALKNLCSEYLRKLIQNDVGGHDSKEDAMACMELILWKVKEEAKLQ
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atgttgccttcgactggttactttaaagctatcggttgtccattttacgaaagtggaagc
tgcgatagaccttactgtcattttaagcattcgaaacgggttttagaagatgtcggggtt
accgcggaagcaaccgagacggtggaaagcggtgctgtgggtcaggttcaagaggcaaaa
gcttgtacgatggtatcgtccggttcagatgttttacaaaaattagtaacggaagctgtt
aaaaaagttctcgcaaatcaagatgccacgaatgcggatcaattttcttgtcaaaatgtt
gtttcccaagtcgtagaaggactaacgccaaccttaacacctggatcatccaatactttt
gatactgtagcaactaatacaacggagaatagagtagacgcgtcaacgtctgtgtcggtc
agtaaagcaattccatgcgtttacaatccaacaccaattgcagaattaaagaaacgtcat
ataccaatagtatcttacatgccaaccagagacagtagagtggcagtgaaacgtaaatgt
tctccggatgggataaaagcttggttggctacaagctgcgaatccggtgaatcaattgaa
actgattgtgaaattaaatacaaacctacagtgatagtcaattctgaaattcgagatact
acacaaagttacatacctacgtacaagtcagattcagctccagcatatttctataaggac
gagagttcgaacgaatatctgtttaagctgagagaatcgtattatccaaagtgtaagaaa
agaagagaggaatatgttccaaagagggtaaagacgccgttaaaaactgtcgagggattg
aatgaatctgcgttagagcaattcaacagaggctttggtacgattgacgaatcactggtt
ctctccaaatctacttctgcgattcaatctaaagagttgtttcaaacttcttgcatggac
ttggaagcgaaattttccgacgacgacgacgacgacgacgacgatgacaatgatgatgat
gatgatggtgacgaggacgacgacgtcgaagaggaggaagaagatgagaataaccatgaa
aatataaataagattgattctgaaaatgctaattgtacatcggtagaagaaaacgagctt
tatcgtaatgttaggagatttgactgtttaaacggtaagagaggtcacgatgcagtgatc
gaagagtggtcgcaggtaaaggttgaaaatgaatgcgacgaggagagaaattgtaatgga
acagtattgagaaacagtaacgttccgaagcaggtgaaattaacgagtaaagaaggtgga
aaaccgttgctacacgaagagaaaaaagtaccgaaagtagatacggatcaagttggcagc
gtaaattcgaaagaatttaaaagcagggataaaaataaagaaaaggatcaaaaggattgt
gataaatctcataaacgatataaagtttcgaagcgtgattcgtacgaaacatcacgttca
gcgactcatagtaaaagcaaaactaagagtcacgtggaacgcgaaaaagagaaagaatca
aggagtacaaagagtgataaggataaaagtagtcacaaggatcgtaagaagcatagaagt
aaagagagggagagggagagagaaagagaaagagaaagagaaagagaaagagaaagcgaa
aggggtggaagtagacataaaactaataagagggataaaggagaagattatcacgagtcg
gagaaatgtaacgaacgcgagtccaagaattgttcggattcgtcgaaaaggcgggaacat
atcgagaagagaaacgatgaaagtaagcgttcgaaaaggaataagaaatcggacgataag
acaagtgggaaatttcgtaggcatgcaaaacacagggaaggaagaagttcagtcgataga
tcggtgagttcgttggaaggtaacactgggtggaacccgatcgatgatgatgacgatgaa
gaaaacaatgattacaatgataataatatgatgagcatggacattgacgtaacttttagt
acatccgattcagatcatgatgtacaagaggagtgcttaaaaatatttcaggaatatcaa
gtaccagaacgaccaaaaccgatggagtcatcgaaagaattaccgttgcacgaaaaggaa
gaaaacgaagagattggtaggaaaagagtggcgcatccttcagcggctacatgtgttacc
aggcaaacgggtgttaatcagcaagggaaaaaagtgatacatccacaacagaagatgtac
gaaaggtggcgtttgatgcgagatgctgtagtagaaaaaagtatttctactgtagccgag
ggaggtagttctggtggcggcggcggctgtagtagtagtaataacgttatcaaggatgta
cgtcgtaattgcgtagaaacggcagcaaccaccacgtgtaacagcgaactcaaattgaac
ggaggaaatggtcgcgtgagaattgctcatgtgccgtacgcaaagtctctagcgatagag
aaaaagaaagtgagagaaaatgcggtagtagcggcagcggcggcggcggtatcggcaata
gtagcaacgccggtgtcttcaaaattgacagagtcacaaaaaacagcagcgcaaactgcc
aagagtggtgtacgaatcgcgcatgttccacaagtggttcctcaattaatacggcctgaa
ccattgcaagtggctactcaaaaatttcccttaaacgttcgtcagtattacgtgaatatg
atgcacgacgtgtgcgtgttaatttacacgaatgccgaggatgcagcacagcgtgcggtt
aaagaagaacacgcttgtcacgaaagatgtaaagcgttagccgtttataaaaattcttgt
atgctcgccgcgcaccgattgaggaaagaagttgatcagaatcagtcggcagaaaataat
gcggcgacaacatcaggtaacatcatagtatcccatgaagcggtacttgctggaaaagca
aagggttcttggagtgttctcaagacaaagaaatccgttacggagtttaggggagtagcg
ttatacggtatgttgaagaaatggataatgacggaacagcaacttcgagataacggattt
cctcggccacatccggatggtcaaaagggccgtgccaaagtttatgtaatcaattctcga
aatcagagtgtcttgtcgaaagtgcctaacgaaagagtttgttgccgttgcggtcaaact
tatatgatcgataaacaaggatttgcattgcaatcgcagaactgtatatatcattggggt
agaaaattcacgatcagaggagagggtaaatacagttgttgtcaacaatatggttccgcg
actggttgttgcgatgcaaaaacacacgtttgggattataccgattacgaaaatcttcgc
ggttatgtaaaaaccttgccaaaaggtacaacgatcgaggaacaaggagtgtacgcgctc
gattgtgaaatgtgttatacgacacagggattggaattgactagaataacgatcattgac
gaagattgcaatgtagtctacgaaacgttggtcaaaccgcaaaatcctataatcgattat
aatacaaggttttctgggataacggaagaaagcatgaaggatgtggcgactacgttatta
gatgtccaagcaacgatactaacaatgttttcggagaaaacgatattagtaggtcacagt
ctggagagtgatttcaaagctttaaggttattacacgagaccgtggtcgacacaagcgtc
atgtttccgcataagaacggatatccacagaagagagcattgaagaacctttgttccgaa
tatttgagaaaactcattcaaaatgatgtcggtggacatgacagcaaagaggacgctatg
gcctgcatggagttgattctttggaaagttaaagaagaagcaaagttgcaataa
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integrated database retrieval system
