Osmia lignaria (orchard mason bee): 117608381
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Entry
117608381 CDS
T09775
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
olg
Osmia lignaria (orchard mason bee)
Pathway
olg03022
Basal transcription factors
olg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117608381
09124 Replication and repair
03420 Nucleotide excision repair
117608381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
olg03021
]
117608381
03036 Chromosome and associated proteins [BR:
olg03036
]
117608381
03400 DNA repair and recombination proteins [BR:
olg03400
]
117608381
Enzymes [BR:
olg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
117608381
Transcription machinery [BR:
olg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117608381
Chromosome and associated proteins [BR:
olg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117608381
DNA repair and recombination proteins [BR:
olg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117608381
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
DEAD
ResIII
AAA_11
nSTAND3
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
117608381
NCBI-ProteinID:
XP_034189313
LinkDB
All DBs
Position
Unknown
AA seq
759 aa
AA seq
DB search
MKISVDGLLVYFPYDYIYPEQYAYMLELKRGLDAKGHCLLEMPSGTGKTITLLSLIVAYM
LENPLDVTKLIYCSRTVPEIEKVIEELKKLMDYYEKEAGSKPKIVGLVLSSRKNMCIHPE
VSREREGKIVDGRCHALTASYIRERHNYDESTPICNFYEGFDMEGKEQMMPPGIYSIDDL
KEYGRDRNWCPYFLARFTILHAQIVVYSYHYLLDPKIAESVSKELSKSSVVVFDEAHNID
NVCIDSMSVKINRRILEKSSANIQFLEKTVAEMREDDANKLKEEYERLVEGLKDARVARE
TDIILANPVLPDEVLQEVVPGNIRNAEHFICFLKRFVEYLKTRLRVQHVVQESPAAFLRD
VQAKVSIERKLLRFCAERLGSFLRTMEITDLTDFSPIILVTHLATLVSTYTKGFTIIVEP
FDDKSPTVLNPILHFSCLDSSIAMKPIFDRFQSVVITSGTLSPLDMYPKILNFHPVIMSS
FTMTLARPCLLPMIVGKGNDQVTISSKYETREDVAVIRNYGQLLVEFAATVPDGLVCFFT
SYFYMESVVAAWYDQGVVDQLQRHKLLFIETQDSAETSLALINYIKACENGRGAVLLSVA
RGKVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGIMVFADKRFSRIDKRSKLPKWIQEHLTDNLCNLSTEEAVQISKRW
LRQMAQPFTRENQLGLSLLTREQLEKEEYGKIEEQAQQN
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcagcgttgatggtttacttgtatattttccgtatgattatatttatccagaa
cagtatgcatatatgctcgagcttaagcgaggcttggatgcaaaagggcactgtttgttg
gaaatgccctcgggcactggcaaaactataactcttttatcattaattgtagcatatatg
ctggaaaatccattagatgttacaaaattaatttattgctctcgtacagtaccagaaata
gaaaaggttatagaagaattaaaaaagcttatggattattatgaaaaagaagcaggaagt
aaaccaaaaattgttgggctggtacttagttcaagaaaaaatatgtgcattcatccagag
gtgagcagagaacgcgaaggtaaaattgtagatggacgctgtcatgctttaacagcatca
tatattcgtgaaagacataattatgatgaatctacaccaatctgtaacttttatgaagga
ttcgatatggaggggaaagaacaaatgatgccaccaggcatatactctattgatgacttg
aaagaatatggcagagatcgtaattggtgtccatattttcttgcaaggtttacaatttta
catgctcaaattgtagtgtacagttatcattatttactggatcctaaaattgcagaaagt
gtgtcaaaagaattaagcaaaagttctgtagtagtttttgatgaagctcacaacatagat
aatgtatgtatagattcaatgagtgtaaaaataaacagaagaatcttagaaaaaagttct
gctaatatacaatttcttgagaaaacagtggcagagatgagagaagatgatgcaaataaa
ttaaaagaggaatacgaaagattagtagaaggattaaaagacgcacgtgtcgcaagagaa
actgacattattttggctaatcctgttttaccagatgaagttttacaagaggtagttcct
ggtaacattagaaatgcagaacattttatctgctttttaaaacgatttgtagaatattta
aaaacgcgtttacgtgtacaacacgttgttcaagaatcgcctgctgcatttttacgagat
gttcaagcaaaagtttcaatagaacgtaaacttttacgattttgtgctgaacgattaggt
tcttttttacgtaccatggaaataacagatctaaccgatttttcaccaataattttggtg
actcatcttgcaacattagtctctacatataccaaaggatttacgatcatagtagaaccg
tttgatgacaaatcgcctacagttttgaatccgattcttcatttcagttgtttagattcg
tcaattgcgatgaaacctatatttgatcggtttcaatcagtagttattacctcaggaaca
ttgtctccattagatatgtatcctaaaattttaaattttcacccggttataatgtcgtct
ttcacaatgacattagctagaccatgtcttttacctatgattgtaggaaaaggtaatgat
caagttacaatttcgtcaaagtatgaaacaagagaagatgttgctgttataagaaactat
ggccagctattggttgaatttgctgctactgttcctgatggattagtctgtttcttcact
tcttatttttacatggaatctgtagtagctgcatggtatgaccaaggcgtggtggatcaa
ctgcagaggcataaattattattcattgaaactcaagattctgcagaaacgagtttagct
ctgataaattatataaaggcttgcgaaaatggaaggggcgctgttcttctttccgtagcg
cgtggaaaagtatcagaaggggttgatttcgatcatcatttaggaagagctgtcctaatg
ttcgggataccttatgtatatacacaatcacgtattttaaaagcacgattagagtatctt
cgtgatcaatttcaaatcagagaaaatgattttttgacatttgacgcgatgaggcatgcg
gcacaatgtgtcggtagagcaattagaggcaaaactgattatggtattatggtctttgca
gataagagattttcaagaatagataaacgaagtaaattaccaaaatggatacaggaacat
ctaactgataatttatgtaacttgtcaaccgaggaggctgtacagataagtaaacgctgg
ttacgtcaaatggctcagccatttacacgcgaaaatcaattaggattgtcattattgaca
cgagaacagcttgaaaaagaagaatatggtaaaatagaagaacaggcacagcaaaattaa
DBGET
integrated database retrieval system
