Osmia lignaria (orchard mason bee): 117608557
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Entry
117608557 CDS
T09775
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
olg
Osmia lignaria (orchard mason bee)
Pathway
olg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117608557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olg03019
]
117608557
Messenger RNA biogenesis [BR:
olg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117608557
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
117608557
NCBI-ProteinID:
XP_034189746
LinkDB
All DBs
Position
Unknown
AA seq
517 aa
AA seq
DB search
MADENEDQWLYGDSTDGKEYAPSSVQPENQENDSISVSIQEKSQTLEDQKMEDTPEPPTE
ASEETEPPEEESSSANNVQNENNTEINKNGVREASSQEDGEAASDSDSDDDVHVVIGDIK
STPAYGSLNIKRGGLLTNASGVPDKLNKQPGKFSIDEFETIGVINGMPAHEFNLDQLEDK
PWRQPGADITDYFNYGFNEETWRAYCERQKRMRSESGVGLILNAGGGGGNAGSMRVPQVA
ITNDNSKYSGIMGPKRAGPPPGRKMAGTIDVIGSSGLASRRNLDKSPPKGNVIQVMTADR
REYSRKPGFPDMSVPPPGAGMPPAFDMPPPGYPGEPAPFYMPETDPYYQSYEPTQDNQWG
NDPTWQPTNLAIPMTEGEDEKDNGPKTIPTMVPPTNIPPLIPPRDSRDRERDRERERDRD
RELDSMGRERERDKDRDRDREREKDSMIRERERERDSMSRDEERDRDRSRSQYRHKDRHR
HRSRSRSRRHKSRSRSPSRRKKKSRRSERERSKEESE
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgagaacgaggatcaatggttgtatggcgattcaacggacggaaaagaatac
gcaccgtcgtccgttcagccagaaaatcaagaaaatgattcgatttccgtttctatacaa
gaaaaatcacaaactttggaagatcaaaaaatggaagatactcccgagccaccaacagag
gcatccgaggagacagagccaccagaagaagaatcttcttcggctaataacgttcaaaat
gaaaataatacagagataaataaaaatggagtaagagaagcttccagtcaagaggatggc
gaagccgccagtgactcggattccgatgatgacgtacacgttgtcatcggagatattaaa
tcaactcctgcctatggtagtctaaatattaagagaggaggactgcttacaaacgcgtca
ggtgtaccagataaattaaacaaacagccaggaaagtttagtatagatgaatttgaaact
ataggtgtaatcaatggtatgcccgcgcatgagtttaatctagatcagttagaagataag
ccatggagacaacctggtgcagacatcaccgattattttaattatggcttcaatgaggaa
acatggagagcttactgtgaaaggcagaaaagaatgagaagcgaatcaggagtaggttta
atactgaatgctggaggaggtggaggtaatgcaggcagtatgagggtccctcaggtggca
attactaacgataatagcaaatattccggtataatgggaccaaagagggcaggacctcct
ccaggaagaaaaatggcaggaacgatagatgtaattggtagctcagggttagcctctagg
aggaatctcgacaaatctccaccgaaaggaaacgtgatacaagtaatgactgcggataga
agagaatattctagaaaaccaggttttcctgatatgagtgtaccacctccaggggcaggg
atgcctcctgcatttgacatgccacctcccggatatcctggagaacctgctccattttac
atgccagaaacagacccgtattatcaaagctacgaacccacccaggataatcaatggggc
aatgatccgacgtggcagccgacgaatttagctatcccgatgacagaaggagaggacgaa
aaagataatggtccgaaaacgataccaacgatggtacctcctacgaatatccctccgtta
ataccacccagagactcgagggaccgtgaaagagatagagaaagagaacgggatcgcgac
agagaattagattcaatgggaagagagagagaaagagataaggatagagatcgcgatcgt
gaaagagaaaaggattcgatgatcagggaacgagaaagagaacgggactcgatgtcacga
gacgaagaaagagatcgtgacaggtcccgatcccaatatcgacacaaagaccgacatcgg
caccgatcgagatcacgatctcgtaggcacaaatccaggtctagaagtccaagtcgacgt
aagaagaaatctagacgctccgagagagaacgttctaaagaagaaagcgaataa
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