Osmia lignaria (orchard mason bee): 117608723
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Entry
117608723 CDS
T09775
Name
(RefSeq) ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
olg
Osmia lignaria (orchard mason bee)
Pathway
olg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117608723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olg03019
]
117608723
03036 Chromosome and associated proteins [BR:
olg03036
]
117608723
Enzymes [BR:
olg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117608723
Messenger RNA biogenesis [BR:
olg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117608723
mRNA degradation factors
5'-3' decay
Decapping complex
117608723
Chromosome and associated proteins [BR:
olg03036
]
Eukaryotic type
Gene silencing
piRNA pathway
117608723
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA
Motif
Other DBs
NCBI-GeneID:
117608723
NCBI-ProteinID:
XP_034190142
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MMTETHINSNHVLNSGLNTKSEIDKMDDVGWKAKLKIPPKDKRIKTSDVTDTRGNEFEEF
CLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDILARAKNGTGKTGAYSIPVLEQVDPR
KDVIQALVIVPTRELALQTSQICIELAKHMDIKVMVTTGGTDLRDDIMRIYQKVQVIIAT
PGRILDLMDKKVANMDHCKILVLDEADKLLSQDFKGMLDHVISRLPHERQILLYSATFPL
TVKQFMEKHLRDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQITQSIIFCN
STQRVELLAKKITDLGYCCYYIHAKMAQAHRNRVFHDFRAGLCRNLVSSDLFTRGIDVQA
VNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYEDRFNLHRIEQELGTEIKPIPK
VIDPSLYVARPEDNNSMEEGNVSK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgatgacagaaacacacataaattccaatcatgttttaaattctggtttgaataccaaa
tcagaaatagacaaaatggatgatgtaggttggaaagccaaattaaaaattccaccaaag
gacaaacgaattaaaactagtgatgttactgatactcgtggcaatgaattcgaagagttt
tgcctaaaacgagaattattgatgggcatctttgaaaaaggctgggaaaagccttcccca
attcaagaagccagtattccgattgcactgtcaggaaaagatattttggctcgtgcaaaa
aatggtactggtaaaactggggcctattcaattccagtgttagaacaggttgatccacga
aaagatgtgatccaggcactggtaattgtacccactagagaattagctcttcaaacatca
caaatctgcattgaactggcaaaacacatggacataaaggtaatggtcactactggagga
acagacttacgagatgacattatgaggatttatcagaaagtgcaagtaataatagcaacg
ccaggaagaattcttgacctgatggacaagaaggttgcgaatatggatcactgtaaaatt
ctagttttggatgaagcagataagcttctgtcgcaagattttaaaggaatgttggatcat
gtcatttctagattaccacatgaacgtcagatactgctgtattcagccacatttcctctg
acggtgaaacaattcatggagaaacacttgagagatccatatgagattaatttaatggag
gaactcacattgaaaggcgtaacacagtattatgcctttgtacaagaacgacagaaagtt
cattgtctgaatacactgttttccaagttgcaaataacacaaagtataatattctgcaat
tcaacgcaacgtgttgaattacttgcgaaaaaaataacagatcttggatactgctgttat
tacatacacgcgaaaatggcgcaggcacaccgaaatcgcgtgtttcatgatttccgagca
gggttatgcagaaacttggtgagcagtgatttgtttactcgtggtattgacgtacaagca
gtgaacgtcgtaatcaattttgactttccaaaaatggcagagacatatttgcatcgtatt
ggccgatcaggacgattcggtcatttaggtatagctattaacctaatcacatacgaggat
cgttttaacttacatcgtatcgaacaagagcttggaacagaaataaaacctattccaaag
gtaatagatccaagtttgtacgtagcaagaccagaagacaacaatagtatggaagagggt
aatgtgtccaagtag
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