Osmia lignaria (orchard mason bee): 117609952
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Entry
117609952 CDS
T09775
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
olg
Osmia lignaria (orchard mason bee)
Pathway
olg03013
Nucleocytoplasmic transport
olg03015
mRNA surveillance pathway
olg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117609952
09122 Translation
03013 Nucleocytoplasmic transport
117609952
03015 mRNA surveillance pathway
117609952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olg03019
]
117609952
03041 Spliceosome [BR:
olg03041
]
117609952
03009 Ribosome biogenesis [BR:
olg03009
]
117609952
03012 Translation factors [BR:
olg03012
]
117609952
Enzymes [BR:
olg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117609952
Messenger RNA biogenesis [BR:
olg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117609952
mRNA cycle factors
Stress granule specific factors
117609952
Spliceosome [BR:
olg03041
]
Complex C
Other components
EJC/TREX
117609952
Ribosome biogenesis [BR:
olg03009
]
Eukaryotic type
90S particles
Helicases
117609952
Translation factors [BR:
olg03012
]
Eukaryotic type
Initiation factors
eIF-4
117609952
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
UvrD-helicase
AAA_30
TniB
Utp25_C
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
117609952
NCBI-ProteinID:
XP_034192643
LinkDB
All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
MAEVKSRRVAQTEDLSNVEFETSEDVEVIPTFDNMGLRDELLRGIYAYGFEKPSAIQQRS
IKPIMKGRDVIAQAQSGTGKTATFSIAILQSLDTQVRETQVLVLSPTRELATQIQKVILA
LGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIKRRVLRTRAIKMLVLDE
SDEMLNKGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTSKFMTDPIRILVKRDELTL
EGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVCSMH
GDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRS
GRFGRKGVSINFVKTDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagtaaagtcacgtcgtgttgcccaaacagaagatttatcaaatgttgaattt
gaaaccagtgaagatgtcgaagttattccaacgtttgataatatgggacttagagatgag
ttgctacgtggaatttatgcctatggctttgaaaaaccatcggctattcaacaacggtca
atcaaaccgataatgaaaggacgggatgtaattgcacaggctcagtctggtacaggaaag
acagcaacattctcaattgccatattacaatccttagatacacaagttagagaaacacaa
gtattagttttatctcctacaagggaattggcaactcagattcagaaagttattctggct
ttgggagattttatgaatgttcaatgccatgcttgtattggaggcaccaatcttggtgaa
gatatcaggaagttagattatgggcaacatgttgtatcaggcacacctggaagagtattt
gacatgataaaaagacgtgtcctaagaaccagagcaataaaaatgctggttcttgatgaa
tcagatgaaatgttaaataaaggattcaaagaacaaatttatgatgtatatagatatttg
ccaccagcaacacaagttgtattagtatctgccacattaccccatgaaattctagaaatg
acaagtaaatttatgacagatcctattcgtattcttgttaaacgtgatgaattgacattg
gaaggaatcaaacaattctttgttgctgttgaaagggaagaatggaaatttgatacatta
tgtgatttgtatgacacattaacaatcacacaagcagtaatattttgcaatactaaacgt
aaggtagattggctaactgaaaaaatgagagaggccaattttacagtctgttctatgcat
ggtgatatgcctcaaaaagagagggataacataatgaaagaatttcgttctggccaaagc
cgtgttttaatcacaaccgatgtttgggcaagaggaatagacgtacagcaagtatctctc
gtaatcaattacgatctacccaacaaccgtgagttatatatccatagaataggtcgttca
ggtcgttttggaagaaaaggcgtttcgatcaactttgtgaaaaccgatgacattcgaatt
cttcgggatatcgaacaatattattcaacgcaaattgacgagatgcctatgaatgtagct
gacttaatataa
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