Osmia lignaria (orchard mason bee): 117609969 Help Entry 117609969         CDS       T09775                                  Name (RefSeq) protein similar-like isoform X1   KO K08268   hypoxia-inducible factor 1 alpha Organism olg  Osmia lignaria (orchard mason bee) Pathway olg04137   Mitophagy - animal olg04140   Autophagy - animal olg04148   Efferocytosis Brite KEGG Orthology (KO) [BR:olg00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     117609969    04137 Mitophagy - animal     117609969    04148 Efferocytosis     117609969  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:olg03000]     117609969 Transcription factors [BR:olg03000]  Eukaryotic type   Basic helix-loop-helix (bHLH)    Factors with PAS domain     117609969 SSDB OrthologParalogGFIT Motif Pfam:  bHLH_HIF1A PAS_3 PAS PAS_11 PAS_9 PAS_4 HLH PAS_2 Motif Other DBs NCBI-GeneID:  117609969 NCBI-ProteinID:  XP_034192660 LinkDB All DBs Position Unknown AA seq 1338 aa AA seqDB search MNGPRVLQQIDDGLPDNQETPGRCSEWLNGQTDYANFYDQDEPTLPPCRFTRGPPIRPVN QDPDLQRSFTDQPFPTDFATLPYDSSLPCMLPPFNEQCGQFQNCSRNRKSDPVDMEDLAM YFETDKSQTNCQVRGYKLPVGTQFRRTRPTYHEYSTKLTNRQFDDASTNDFARTGWIDAR FCQNCPDLFAFCTEERWLQCPASDRCPLYNDTGYYSFGRNNVLPPCFYEDLQQEYGYNED EQLLEDYLSNEKRKEKSRDAARCRRSKETDIFTELAAALPVASDQAAHLDKASVMRLAIA YLKVRSVVDAIPAPVAKSESSNEMDELFSKALNGFMLVLSSDGNMIYLSENVSDYLGVSQ MDMMGQSVYEYSHPCDHDELRECLSSSPTKNNEKRVCSFFLRLKCTLTSKGRKVNLKSAS YKVIHCTGRLTYSRDPVLNSLETEDEEEKSEDELNERDMGASLVLVGCPIPHPSNIEIPL GRHTFLSKHSLSMKFTYADEKLAEYLGWNSEELMGQSVFEFYHALDNLALDKSFKSLFSK GQCETVAYRFLGKRGGYAWVVTQATLIHCSKQQKPLSVVCVNYILSGVEREDEVYSARQL AARDTENVVKPDKVNVGSSDVVEPTPAKLHLQLRVNSNKVEEAVTFDIVDRELSVTVDQQ PELPSATFEPAKSLPVTASTFRLAANKPKKGSPQLQDGSRKDNTFPRPVHATEKSFVGVQ ALKDSLEESLKENNEPKRKQQNRQQPTGRTPFVFQGKPAVEYDPETTVRQDRPQTVTRHL FAPITAQQQQQQEQIPCRPPPQTATASIFAPRTEDMNKGFLTFSEDHPGLTMLKDEPEDL THLAPTPGDVCVPLEDTPFLSDMLDEFILANDSYCPLLSPGGALAPELRPTDFGDPLKDA DLGDSRNKSLGVSLADSDPFMYGDSPGSPCSIDPNSVSPTLSKYRQSPERSIDSLGSPTA GSGADGLSEDEMLMLGLSDSMADDELALRAPYIPMSDQDEALDLLISNNMVMWSPPHTTD KSCPKWMLDEKEQRTSDSSLAQLLKTDQVVSRKYNDHGGGLVNPVQVLGQIPRKNTNLDS CNWSSKLDRPTKRIHTASSMDTIGNDNKRIKCDESTKRGSLVLEDHLLGKQVSSRKTPSV TDSQLLRRLVSQQQTALRSNDYSNESFDDRRNKDRMQTEPEVDETEVDRGGTKGGGGDKC RRKGIENGDATSKRNPPACNSVLMNLLVSGCDENLMDSRNVPTLYPKHLTTPLSVNLENQ MVPQCPDSVGSTISSSFDQLSPVSSKQLSNTFINGGTIVSPSSPIMFENFDYDSTLSNSG LLQVQPDLFGTLLDRNLV NT seq 4017 nt NT seq  +upstreamnt  +downstreamnt atgaacggtccacgtgtgctgcagcagatcgatgatgggttgccagataaccaggagacc ccaggtcgttgctccgaatggcttaatggacagacagactacgcgaatttctacgaccag gatgaacccactctaccaccctgtcgatttactaggggaccaccgatccgacccgttaac caggatccagatcttcagagatcttttaccgatcaaccattccctacagactttgctacc ctgccttatgattcgtccctaccttgcatgctaccacccttcaacgagcagtgtggtcaa tttcaaaattgttcaagaaatagaaaatcagaccctgtagacatggaagatttggcaatg tacttcgagacagacaagtcccagacgaattgtcaggttcgaggttataagctgcctgtc ggtacacagtttcgtcggaccagacccacttatcatgaatattcaacgaagttgaccaac aggcaattcgatgacgcctcgacgaacgatttcgctcgtacgggttggatcgatgcgaga ttctgtcagaattgtcccgatttgtttgctttttgcacggaagaacgatggctacagtgt cccgcgagcgatcgttgccccctctacaacgacaccggttactactcgttcggcaggaac aatgtcctgccaccgtgtttttacgaggacctgcaacaagaatacgggtacaacgaggac gaacaacttctcgaggattatttgagcaacgagaagaggaaggaaaagtctcgtgatgct gcacgatgtcgtcgaagcaaggaaacggacattttcacggaactggctgctgcccttccg gtcgcatcggaccaagcagcccacctagataaggccagtgttatgagactcgctatcgcc tatttgaaagtgcgttcggtagtagatgccattccagcaccagtggctaagtcagagtcg tcgaacgaaatggacgagctattttctaaagccctaaacgggttcatgctggtgctgtcc agcgatgggaacatgatatacctttcagagaacgttagcgattatcttggcgtttctcag atggacatgatgggtcagagtgtatacgagtacagtcatccctgcgatcatgacgaatta cgggagtgtctgtcctcgagcccaacgaaaaacaatgaaaagcgtgtttgcagtttcttc ctgcgtctgaaatgcacgctgaccagtaaaggaaggaaggtgaacctgaagagtgcttcc tataaggtgattcactgtaccggtagattgacgtacagtcgtgaccctgtattgaattcg ttggagaccgaggacgaggaggagaaaagcgaggacgagttgaacgaacgcgacatggga gcttccttggtgcttgtaggatgtcccataccgcatcccagtaatattgagatccctctg ggtcgtcatactttcctctctaagcacagtctcagcatgaagttcacctatgctgatgag aaattggccgagtatttaggctggaacagcgaggaattaatgggacagtctgttttcgag ttctatcacgccctcgacaatttggctctggataaatcttttaaatcactgttcagcaag ggtcaatgcgaaacagtggcgtacagattccttgggaaacgcggtggatatgcatgggtc gtaacacaagccaccctcatacactgctctaaacaacagaagccactatcagtcgtctgt gtgaactacattctaagcggcgtggaacgcgaggatgaggtgtacagcgcgaggcagctc gcagcacgcgacaccgagaacgtcgtgaagccggacaaggtaaacgtcggctcgagcgac gtagtcgaaccgaccccggcgaagcttcacctgcagctccgagtgaatagcaacaaagtc gaggaggctgtcacattcgacatcgtcgatcgcgagctttccgtgacggtcgatcaacaa ccggaactaccgtcggctaccttcgaacccgcgaaatctttgccagtgaccgcctcgact ttccgtctggcggctaataaaccgaagaagggatctcctcagcttcaggacggctcgcgg aaggataacaccttcccgagaccggtccacgctacagagaaatcgttcgtcggtgtgcaa gctctcaaggactcgctcgaggaatcgctgaaggagaacaacgagccgaaacggaagcag cagaaccgtcagcagccgactggccgaactccgttcgtgttccagggtaaacctgcagtg gaatacgatccggagacaacggttcgtcaggacaggcctcagaccgtgaccagacacctg ttcgcgccgatcaccgcgcaacaacaacagcaacaggaacagataccctgcagaccaccg ccgcaaactgcaacagcgagcatcttcgcgcctcgtaccgaggacatgaacaaaggcttc ttaactttcagcgaggatcatccaggcctaacgatgttgaaggacgaaccggaggatctg acccatctggcgcctacacctggtgacgtctgcgtccccctggaagacaccccattcctc tccgacatgctggacgagttcatcctcgccaacgacagctattgtcccctgcttagcccc ggcggtgccctcgcgcctgaactaagacccacggatttcggcgatcctttgaaggacgcc gacctgggggattcgaggaacaagagcctcggggtgtctctcgccgacagcgacccgttt atgtacggagactctcctggcagtccttgcagcatcgatccgaactcggtttcgcctacc ctctctaaatatcgtcaaagtccagaacgaagtatagactcgctaggaagcccaacagct ggcagtggggcggatggattatcagaagatgaaatgttaatgttaggtttgagcgacagc atggctgacgatgaattagcactccgagcaccgtacatcccgatgtccgatcaggacgag gcactcgacttgctgatcagtaacaacatggttatgtggagcccaccacatacgacggat aaaagttgtccaaaatggatgctagatgaaaaagaacaacgaacgtccgattccagttta gcacagctcttaaaaacggaccaagttgtttccagaaagtacaacgaccatggagggggc ctggttaatccggttcaggttctcggtcaaatacctcggaaaaacacaaatctagatagc tgtaattggtcctccaagctggacagaccaacgaaacgtatacacactgcctcctcgatg gacacgataggcaacgacaataaacgtatcaaatgcgacgagtccacgaagcgcggcagc ttagtcctggaggatcatctgttgggtaaacaggttagctcgaggaagacgccgagcgtc accgacagtcagcttcttcgacgtttggtgtcccagcagcaaacggcccttaggagcaac gattactccaacgagtcgttcgacgatcgacgtaacaaggaccggatgcaaacggaaccg gaggtggacgagaccgaagtggaccgaggtggtaccaaaggcggcgggggagacaagtgt cgtcgaaaggggattgaaaacggcgacgcgacctctaagcggaatcctccggcgtgcaac agcgtgctaatgaatctcctggtgtccggctgcgacgaaaacttgatggattcacgcaac gtgccaacgctgtatccaaaacatttgacaacacctctgtcagtgaacctggagaaccaa atggtgcctcagtgtcccgattctgttggttccaccatatcatcatccttcgaccaatta agtccagtctcgagtaaacaactgtccaacacattcataaacggaggtaccattgtttca ccgtcctcgccgatcatgttcgagaatttcgactatgattcaacactgtccaacagcggg ttgctacaagtgcagccagacctatttggaactctgttagatcggaatctcgtttaa

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