Osmia lignaria (orchard mason bee): 117611544
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Entry
117611544 CDS
T09775
Name
(RefSeq) 3'-5' RNA helicase YTHDC2-like
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
olg
Osmia lignaria (orchard mason bee)
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
olg03041
]
117611544
Enzymes [BR:
olg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117611544
Spliceosome [BR:
olg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117611544
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
OB_NTP_bind
R3H
DEAD
Helicase_C
Ank_2
nSTAND3
Ank
HA2_N
AAA_22
AAA_19
Ank_5
PhoH
ATPase
Cas_TM1802
NPHP3_N
T2SSE
NACHT
Motif
Other DBs
NCBI-GeneID:
117611544
NCBI-ProteinID:
XP_034195380
LinkDB
All DBs
Position
Unknown
AA seq
1157 aa
AA seq
DB search
MPRRNRHKKTPLIGEDTRIAVNLTLKKLLETPDQKELEFPSSYTAEERAYIHKLSHELGL
KSKSRGKGTNRFLTVYKREGSTIVQADAVIKLQKASRQSIYNLLQTFPLNHKECQDLLPP
IERERPLNAEVSVSTSTKAMGRLNNSVPQIPQLKTNFDVLNYRKALPIFNSREDILNALN
SNQVVIIGGETGSGKTTQVPQFILEHCQQRHQLCRIICTQPRRLSAVSVAERVAFERDEK
IGQTFGYQIRLESRVAPKTLLTYCTNGVLLRTLMAGDSALSTVTHVIVDEIHERDRFCDF
LLIALKDALQKHKSLKLILMSATLDVSVFVKYFSKCAVINVLGRSYDVDTYFLEDVLKIT
GYMTKEMLSKRKELLNKKDQRKLLESWTQYKPQQLGSHTGNERCLLPAPILAQQNEPLPE
KIKLEPWLIEEMDKSISEAWLRGGEDNFAQLLYFILSENVSVDYQHSTTSVTPLMVAAGR
GCINTTEQLLNLGANLNLRAGNEWTALDWARNMNQTECAELIEAYMKTYDCTVQDDTITH
AKDVSLSEEDKLLLDVYHHTFNDDNINYDLLLQLIMHIHLKMPLGSLLIFLPGYDDIVTM
REKINNEEKEMNQGLRYVLYILHSNMQTCDQKKVFKPSPMGTRKIILSTNIAETSITIDD
VVYVIDSGKVKEKSFDAISGVCTLKSNWISQACAKQRKGRAGRCRKGICYRLFSSVRYNS
MQPYQTPEILRLPLQELCLYTKHLAPGNTPIAEYLDRAIEPPSNMVTRNAVQLLKTIDAL
DPWEDLTELGSHLLDLPIEPRLGKMLLYAVVLKCLDPVLTIVCSLAYKDPFVLPSQPSQK
RAATAARKRFATNTYSDHMAVLRAFQGWQNARASGKERAFCEQNFISAAVMEMVVGMRTQ
LLGQLRASGFVRARGPGDIRDLNSNSENWAVVKAALTAGLYPNLIRVDREHLQLRTQKEV
KVFFHPSSTLRDYPKSPRMTSAQTHATNVESLPCDWLLYEEMSRTGRFCHVRMATLVNPL
TVALFCGPARLSVDVIYEAESVPESESDSEADENNEGTIFKLDDWVVFKLDPETARFFLH
LRQKWNALFLRRMKTPNKAMSQLDEKVVSTLVNVITNEEQACGLQQPSGIGQRPRPLIVD
YYPANARRTDDFVERNF
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgccacgtagaaatcgtcacaagaaaactcctcttattggagaagacactagaattgca
gtgaatttaactctaaagaagttattggagactcctgaccaaaaagaattagaatttcct
tcttcgtatacagcagaggaaagagcttatattcataaactatcacatgaacttggacta
aaatccaaaagtagaggtaaaggtacaaatcgctttctaacagtgtacaagagagaagga
tcaaccatagttcaagctgatgctgttatcaaattacagaaggcatcaagacagagtatt
tataatttattgcagacttttccattaaatcataaagaatgtcaagatttattaccacca
attgaaagggaaaggcctcttaatgcagaagtttcagtaagtacaagcactaaagcaatg
ggtagattaaataacagtgtaccacaaataccacaattaaaaactaatttcgatgtatta
aactatcgcaaagctctgccaatatttaactctagagaagacattcttaatgctttaaat
tctaatcaagtggttataataggaggtgaaacgggtagtggtaaaactacccaagtacct
caatttattcttgaacactgtcagcaaaggcatcaactttgtagaattatttgtactcaa
ccacgaagactgtcagctgtttctgtagctgagagagtggcatttgaaagagatgaaaaa
attggtcaaacatttggctatcaaataagacttgaaagtagagttgctccaaaaactctt
ttaacatactgcacgaacggtgtattgcttagaactcttatggcgggtgattctgcttta
agtaccgttacgcacgttattgtagatgaaattcacgaacgcgatagattttgtgacttt
cttctaatagcactgaaagatgcactgcagaaacacaagtccctcaagcttatacttatg
agtgctacattggatgtcagtgtttttgtaaagtattttagcaaatgtgcagttataaat
gttttgggtagatcgtacgatgttgatacgtattttctcgaagatgttttaaaaataact
ggttatatgacgaaagaaatgctttcaaagagaaaggagcttttgaataagaaagatcaa
cgtaaacttttagaaagttggactcaatataagcctcaacaattaggatcccatactggg
aacgaaagatgtttgttgcccgctccaatcttagcacaacaaaatgaaccacttccagag
aagatcaaattagaaccttggttaatagaagaaatggataaaagtatttctgaggcatgg
ttgcgtggtggtgaagataactttgcacagcttttatatttcatactttctgaaaacgtt
tctgtagattatcaacattccacaacgtccgtaacgccgcttatggtggctgcaggtaga
ggatgtatcaatactacagaacaacttttaaatcttggagcaaatttaaatttacgagcg
ggcaatgaatggactgccttagattgggcaagaaatatgaatcagaccgagtgtgctgaa
ttaatagaagcatatatgaaaacttacgattgtacagtacaagatgatacaataacgcat
gctaaagatgtttcactttcggaagaagacaaacttttattagacgtgtatcatcataca
tttaatgatgacaatattaattatgatcttctcttacaattaattatgcatattcattta
aaaatgcctcttggttctctattaatatttctgccaggatatgatgatattgtaactatg
agggaaaaaataaataatgaagaaaaagaaatgaatcagggtttacgctacgttttatac
atacttcattcaaacatgcaaacatgtgatcagaagaaagtatttaaaccaagccctatg
ggaaccagaaaaattattctttcaaccaacatcgctgagacaagtataacgattgatgat
gttgtgtatgttatcgattcgggaaaagttaaagaaaaatcttttgatgctatatcagga
gtatgcacacttaagtccaactggatctcccaagcttgtgcaaaacaacgtaaaggtaga
gcaggaagatgtaggaaaggcatttgctatcgtctgttctcttcagttcggtacaacagt
atgcagccctatcaaaccccagaaattttacgattaccattgcaagaattatgtctatat
acaaaacatttagccccggggaatacacccattgcggaatatttagatcgtgctatagaa
ccaccttctaatatggtaacaagaaacgcggtacaattattaaaaactatcgatgcatta
gacccatgggaagatctcaccgaattaggaagtcatttacttgatttaccaattgaacca
cgactgggaaaaatgttactgtatgctgttgttttgaaatgtttagacccagttttaacc
attgtatgtagtctggcatacaaggatccttttgttttaccttcacaaccgtcgcaaaaa
agagctgcaacagcagctcgtaaacgattcgcaaccaatacgtattccgatcatatggca
gttttacgtgctttccaaggttggcaaaatgcacgtgcaagtggcaaagaacgtgcgttt
tgtgaacaaaattttatttctgctgccgtgatggaaatggtggttgggatgcgcactcaa
cttcttggccagcttcgtgcatcaggatttgttagggcaaggggaccaggagatattaga
gatttgaattctaattctgaaaattgggctgttgtaaaagctgccctgactgctggttta
tatccaaaccttataagagtagacagagagcatttgcaattaagaacacaaaaagaagtg
aaagtatttttccatccatcatcaactttaagagattatccgaaatctccaagaatgaca
tctgctcaaacacatgcaactaatgtagaaagtttaccatgtgattggttactttatgag
gaaatgagtcgcacaggacgattctgtcacgttagaatggctacattggttaatccgtta
acagtggcattattttgtggaccagcaagattatcggtagatgtaatctacgaagctgaa
tctgtaccagaaagtgagtcagattctgaagctgatgagaataatgaaggaacgattttc
aaacttgatgattgggtagtgtttaaacttgatcccgagactgctcgattctttttacat
ttaagacaaaaatggaatgcattattcttaagacgtatgaaaacgccaaacaaagctatg
tcacaattagatgaaaaggtagtgagtactttagtaaatgtaattactaatgaagaacaa
gcgtgtggactacaacagccgtctggtatcggtcaaagaccccgtcctttaattgttgat
tattatcctgccaatgctagacgaacggatgattttgtagagagaaatttttaa
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