Olivibacter sp. LS-1: FKG96_00595
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Entry
FKG96_00595 CDS
T06195
Name
(GenBank) hypothetical protein
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
oli
Olivibacter sp. LS-1
Pathway
oli03030
DNA replication
oli03430
Mismatch repair
oli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FKG96_00595
03430 Mismatch repair
FKG96_00595
03440 Homologous recombination
FKG96_00595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oli03032
]
FKG96_00595
03400 DNA repair and recombination proteins [BR:
oli03400
]
FKG96_00595
Enzymes [BR:
oli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FKG96_00595
DNA replication proteins [BR:
oli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FKG96_00595
DNA repair and recombination proteins [BR:
oli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FKG96_00595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
FeoB_associated
CCDC-167
QueC
DUF7249
DUF6587
Motif
Other DBs
NCBI-ProteinID:
QEK99351
LinkDB
All DBs
Position
complement(162269..163384)
Genome browser
AA seq
371 aa
AA seq
DB search
MQFKDIIGQEKVKAHLINTVKENRVSHAQLFLGPEGSGSLPLAVAYAQYINCENKQENDS
CGSCSSCRKYAKIIHPDLHFSYPFFASHKEDTASTFIDQWRNSFLRNPYLNLETWRSSLD
AGNKQANINIAECHHIIQKLSLKAFEAPYKVLIMWLPEFLDKEGNTLLKLIEEPPEKTLF
LLVTQNQDQLLNTIISRTQLVKVNALDKVSLAEFLVREKGVSHEKALQLAYISEGNVQQA
LSLLSDDPGGGYFQLFVQWLRFCFGARVLDLLQLVEEDLSKLGRENQKSFLLYAIQMMRD
VVLFKEGAKTLVHLPEAEMSFVEKFSPLYETAKLEACVSIFEKTSYYVERNANPKILFLD
VSLQLVLLFKH
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttaaagatataataggacaggaaaaagtaaaagcgcacttgatcaatacggta
aaggaaaatagagtaagccacgcgcaactttttcttggtcccgaaggaagcggaagttta
ccacttgctgtcgcctacgcgcaatacattaattgtgaaaacaagcaagagaacgatagc
tgcggtagttgcagttcgtgtagaaaatatgcgaagattattcatcccgatctgcacttt
tcctaccccttttttgcgtcgcataaagaggacacggccagtactttcattgatcaatgg
cgaaacagtttcctgagaaatccctacctcaatctggaaacctggcgaagtagcctggat
gcaggaaataaacaggcgaatatcaacattgctgaatgccatcacattatccaaaaatta
agtctcaaagcttttgaagctccctataaggtgcttattatgtggttgcccgaatttttg
gataaagaagggaataccttacttaagttgattgaggagccgcctgaaaaaacgctattc
ttgctggtaacgcaaaatcaggatcaattactgaacaccattatatcccgaactcaatta
gtaaaagtaaatgcacttgataaagttagtctggcggagtttttggttcgtgaaaagggt
gtgtcacatgagaaggctttgcagctggcttatattagcgagggtaatgtgcagcaagcg
ctgtcccttttgtccgatgatccgggtgggggatattttcagctttttgtacaatggttg
cgcttctgttttggcgcacgtgtactcgatcttttgcaactggttgaagaagatttgtcc
aagcttggacgtgaaaatcaaaaaagtttcttactttacgctattcaaatgatgcgtgat
gtagtgttatttaaagagggtgcaaaaacgctcgtacacctaccggaggcggaaatgtct
tttgttgaaaagtttagcccgctttatgaaacggctaaattggaagcttgtgtcagcata
tttgaaaaaacaagttattacgtagaacgcaatgcaaaccctaaaatcttatttttagat
gtatctttgcaattagttttattatttaaacactaa
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