Olivibacter sp. LS-1: FKG96_01190
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Entry
FKG96_01190 CDS
T06195
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
oli
Olivibacter sp. LS-1
Brite
KEGG Orthology (KO) [BR:
oli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oli03400
]
FKG96_01190
DNA repair and recombination proteins [BR:
oli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
FKG96_01190
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
Calpain_III
Motif
Other DBs
NCBI-ProteinID:
QEK99465
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All DBs
Position
complement(300142..300642)
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AA seq
166 aa
AA seq
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MAYNPTNENPIKVPRFKETAGFYTTKQRSRIMSKIKGKDSKPELKLRKALWAKNLRFRLH
DKDLPGKPDIVIKKYKLAIFIDGEFWHGYNWEENKSRIKSNRAFWIPKIQRNMQKDRQDH
EALRAIGFTVFRFWSKEVTNNLPKVVNQIMLFIETAKEIRIPYKND
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atggcttataatcccacaaacgaaaatccgatcaaggtacctcgatttaaggaaacggct
ggcttctacacgacgaaacagcgaagtaggattatgtccaagataaaagggaaggattca
aagccagagttgaagcttcgaaaggctttatgggcaaaaaatcttcgttttcgtttgcat
gataaggatttgcctggaaaaccggatattgtgatcaagaagtataaattagccattttc
atcgacggtgagttttggcatggatataattgggaggaaaataaaagtcgtattaaaagc
aatcgggcattctggatccccaaaatccaacgcaatatgcagaaagatcgtcaagatcat
gaggcattacgtgcaataggttttactgtttttcgtttttggtcaaaagaggttacaaac
aatcttcctaaagttgttaatcagatcatgttgttcattgaaacagcaaaggaaataaga
ataccctataagaacgattaa
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