Olivibacter sp. LS-1: FKG96_01790
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Entry
FKG96_01790 CDS
T06195
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
oli
Olivibacter sp. LS-1
Brite
KEGG Orthology (KO) [BR:
oli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oli03400
]
FKG96_01790
DNA repair and recombination proteins [BR:
oli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
FKG96_01790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
QEL04258
LinkDB
All DBs
Position
complement(419519..420007)
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AA seq
162 aa
AA seq
DB search
MVFHPAGEDPIKVPRFEEAAGFYTTKQRSYNMSRVKGKNSKPELTLRRALWAKNLRFRLH
DKALPGKPDIVIKKYKLAIFVDGEFWHGYNWEKNKHQIKSNKAFWIPKIERNMQKDRINH
EKLREMGYTVFRFWSDEVKRNLPRVVNQIMLYVETAREIKIP
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atggtatttcatcccgcaggcgaagatcccattaaggtgccacgttttgaagaggcggcc
ggcttttatactacgaagcagcgtagttacaacatgtcgcgtgtgaaaggcaaaaactct
aaaccggagttgacgctgcgtcgtgcgctttgggccaaaaatctgcggtttagattacat
gataaggccttacccggcaaacccgatatcgttataaaaaaatacaaattggcaattttt
gttgacggtgaattttggcatggttataactgggaaaagaacaaacatcaaattaaaagc
aacaaggcattctggatacccaaaattgaacgtaacatgcagaaagaccgtatcaatcat
gaaaagcttagagaaatgggctatactgtctttcgtttttggtcagacgaggtgaaaaga
aatctaccacgggttgtcaatcagattatgctttatgtagaaacggccagagagattaaa
ataccttga
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