Olivibacter sp. LS-1: FKG96_02205
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Entry
FKG96_02205 CDS
T06195
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
oli
Olivibacter sp. LS-1
Pathway
oli00521
Streptomycin biosynthesis
oli00523
Polyketide sugar unit biosynthesis
oli00525
Acarbose and validamycin biosynthesis
oli00541
Biosynthesis of various nucleotide sugars
oli01100
Metabolic pathways
oli01110
Biosynthesis of secondary metabolites
oli01250
Biosynthesis of nucleotide sugars
Module
oli_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
oli00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FKG96_02205 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FKG96_02205 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
FKG96_02205 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FKG96_02205 (rfbB)
00525 Acarbose and validamycin biosynthesis
FKG96_02205 (rfbB)
Enzymes [BR:
oli01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
FKG96_02205 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
NAD_binding_10
KR
NmrA
Motif
Other DBs
NCBI-ProteinID:
QEK99659
UniProt:
A0A5C0ZDK2
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All DBs
Position
544918..545958
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AA seq
346 aa
AA seq
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MNIIITGGAGFIGSHVVRRFVNNYPQYHIINLDKLTYAGNLANLSDIEDQVNYEFVKGDI
TDAAFINELFERVKPDAVIHLAAESHVDRSISNPLDFVLTNVVGTVNLLNAARKYWEGDS
SKRFYHVSTDEVYGALGESGMFTEETKYDPHSPYSASKASSDHFVRAYHDTYGLNTVISN
CSNNYGSHHFPEKLIPLAIHNIKNNKPVPVYGKGENVRDWLWVEDHARAIDVIFHQAKAG
DTYNIGGHNEWKNIDLIRLLCNIMDRKLGRPAGESAKLITFVKDRAGHDLRYAIDSTKLQ
KDLGWVPSLQFEEGLEKTVDWYLANEEWLNNVTSGAYQEYYNKQYS
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcattataacaggaggtgccggatttattggatcgcacgtagtaagacgtttt
gttaacaactatccgcaataccacattattaacctcgataaattaacatatgccggtaac
cttgccaacttatcggatatagaagatcaggtgaactatgaattcgtaaagggtgacatt
actgacgctgcatttatcaatgagctgttcgagcgtgtcaaaccggatgccgtaatccat
cttgctgctgagtcgcacgtagatcgctctattagcaaccccttggattttgtactgacc
aatgtcgttggaactgtcaacttattgaatgctgcgcggaaatactgggaaggtgatagt
agcaaacgtttttatcatgttagtacagatgaggtctatggcgccttgggagaaagtggt
atgttcaccgaagaaacgaagtacgacccacactcaccttactctgcttcaaaggcaagc
tccgatcactttgtcagggcctatcatgatacgtatgggcttaatacggtcatctcaaat
tgttcaaacaattatggttcccatcacttcccggaaaaactgattcccttagcaattcat
aatataaaaaacaataaacccgtgcctgtttatgggaaaggggaaaatgttagggattgg
ttgtgggtagaagaccatgcccgtgccatcgacgttattttccaccaagcaaaggccggc
gatacctacaatattggtgggcataatgaatggaaaaacattgatctgatccgattactt
tgtaacattatggatcggaagttgggacgacccgcaggcgaatcggcaaaacttatcact
ttcgttaaagatcgtgcaggccatgatttacggtatgcgatcgattccacaaaactgcaa
aaagatttgggatgggtgcctagcttacagttcgaagaaggattggaaaagaccgttgat
tggtatttagcaaatgaagaatggctaaataacgtaacctcgggagcctatcaggaatat
tataataagcaatatagttag
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