Olivibacter sp. LS-1: FKG96_02585
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Entry
FKG96_02585 CDS
T06195
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
oli
Olivibacter sp. LS-1
Brite
KEGG Orthology (KO) [BR:
oli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oli03019
]
FKG96_02585
03009 Ribosome biogenesis [BR:
oli03009
]
FKG96_02585
Messenger RNA biogenesis [BR:
oli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FKG96_02585
Ribosome biogenesis [BR:
oli03009
]
Prokaryotic type
rRNA processing factors
FKG96_02585
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
PoNi_N
DnaJ_CXXCXGXG
S1
Motif
Other DBs
NCBI-ProteinID:
QEK99730
UniProt:
A0A5C0ZJD2
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Position
complement(651144..652697)
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AA seq
517 aa
AA seq
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MVKELIVDSSPETGTTIALLQDKQLVELNKEQVNNNYAVGDIYLGRIKKIMPGLNAAFVD
VGYSKDAFLHYLDLGPQVQSLIKLTKLVKNGSYKDKLLNSLKLEKDINKAGKISEILSRN
MLLPVQIAKEPISTKGPRLSSDLSIAGRFVVLVPFSDAVSISKKIKSNTERNRLKKIVEG
IKPQNFGVIIRTVSEGKGVAELEKDLRDLITKWESFTKRLASTDPAKKILGEMDRTSTIL
RDILTDEFSHIYINDPIIYEETKSYIQEISPDLEKIVKLYKHKDPIFEHFGIEKQIKAAF
GKIVNLQGGAYLVIEHTEALHVIDVNSGNRTANKENQEDNALLVNKEAAKEIARQLRLRD
MGGIVVVDFIDMHKPTNRKELHDYLKECMGNDRAKHTILPPSKFGLVQITRQRVRPEMTV
VTNEKCPACGGTGEIRASIVLMDDIESNLSYVLNEQNEKNITLCVHPYIEAFIKKGFMSR
RLKWFFRYGKWIKVKAISSYFMNEFHFLNAKEEEIKL
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
ttggtaaaggaattaatagtagattcttccccggaaacggggacaactattgctttacta
caggataaacagcttgttgagttaaataaagaacaggtaaataataattatgctgttggc
gacatctatttgggcagaataaagaaaataatgcccgggttgaatgctgcttttgtagat
gtaggctactcgaaggatgcttttttgcattatttggatctagggccacaggtacagtca
ctcattaagcttaccaagctagtaaagaatggcagctataaagataagctgctcaatagt
ttaaaactagaaaaggatatcaataaagcaggcaaaatttctgagatcctaagtcgtaac
atgttgttgccggtacagattgcaaaagagccaatctcaaccaaagggccgcgtttaagt
tccgatttatccatcgcaggaaggtttgtcgttttggtacctttttctgacgcggtttcg
atttcgaaaaaaattaaaagtaacaccgagcgaaaccgacttaaaaagattgttgaggga
atcaaacctcagaattttggcgttattatccgtaccgtttcggaaggaaaaggagttgct
gaattggagaaagacctccgggatttaatcaccaagtgggaatccttcacgaaacgtctt
gcttctactgatcctgcgaaaaaaatattgggtgaaatggatcggacatccaccattttg
cgcgatatattaacagacgagttttctcatatctatatcaatgatccgattatttacgag
gagacgaagtcttacattcaggagatttctcctgatttggaaaagatagtaaagctgtac
aaacacaaggatccgatctttgaacacttcggtatagagaaacagattaaagccgcattt
ggtaaaattgttaatctgcagggaggggcttatttggttatcgaacatacggaagcactg
catgttattgacgtgaatagcggaaaccgaacggccaacaaagagaatcaggaggacaat
gccctcttggtgaataaggaggccgccaaagaaatagcccgtcagcttcgtctacgtgat
atgggaggaatcgtggttgtcgattttatcgatatgcacaagccaaccaacaggaaggag
ttgcacgactatttaaaggaatgtatgggcaacgatcgcgctaaacatactattctcccg
ccaagtaaatttggattggtgcagattacaaggcaacgtgttcgtcctgaaatgacagtg
gttactaatgagaaatgtccggcctgtggaggtaccggcgaaattcgagccagtatcgta
ttaatggatgatattgagagtaatttaagttatgttttaaacgaacaaaacgagaagaat
attacgctctgcgttcacccatatattgaagccttcattaagaaaggctttatgtccaga
cgcttgaaatggtttttccggtacggtaaatggatcaaagtaaaggctatttcgtcttac
tttatgaatgaattccacttcttaaacgccaaagaagaagaaataaaactataa
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