Olivibacter sp. LS-1: FKG96_02675
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Entry
FKG96_02675 CDS
T06195
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
oli
Olivibacter sp. LS-1
Brite
KEGG Orthology (KO) [BR:
oli00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
oli01011
]
FKG96_02675
Enzymes [BR:
oli01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
FKG96_02675
Peptidoglycan biosynthesis and degradation proteins [BR:
oli01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
FKG96_02675
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM2_CERK1_LYK3_4_5
RecQ-1-like_HTH
Motif
Other DBs
NCBI-ProteinID:
QEK99746
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Position
673118..674530
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AA seq
470 aa
AA seq
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MILKRFSAFAVGMLFCVQLTQATTSKDTDEPSKLSASSNVLSSEDSTLRKNSHPHDLSWY
LAPQNIKKQLDTLQKVIPLTYNSYVQSYIDAYTAPRYKNHLSKMLELAQYYFPIYEKVFA
ETDLPQEIKYLSIIESALNPHAVSRVGATGPWQFMFATAKAFNLNIDNYVDERKDPYAAT
YAAAAYLKDAYNEFGDWQLAIASYNCGKGNVARAIQRSGIEKPDFWTVRKYLPQETRNYV
PAFIAMTFVLNNYEVLGIATPSGSGSALTAEKGTDVILIDKFIPLSGIAEALNLDLNQLI
TLNPAYKKSIINGTPEAPKRLVVPAVDKTAYASLYAALNTPTDAPAKVITASNTDRKAIY
HRVRRGESLSSIANKYQVEVQDLKVWNRLRRNAIVPGQRLKISEPGYAAGKKTSLERKSV
NYVTYKVKRGDTLSGIAQKYRGATVNNIKAMNNLNGSSIKPGMTLKINSL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgatattgaaaagattttcggcatttgccgtaggtatgctattttgcgttcaattgacg
caggcaacaacaagcaaagataccgacgaaccttcgaaattaagtgcctcttcgaatgtt
ctatctagcgaagattctacactcaggaaaaattcccaccctcacgatctctcctggtat
ctcgcccctcaaaatataaaaaagcaactggacactttgcaaaaggtaatccccttaacg
tacaatagctatgtccaatcttatatagatgcttatacggcaccgcgctataaaaaccat
ctttctaaaatgcttgagttagcgcagtactattttcccatttacgagaaagtatttgca
gagacggatttgccacaggaaataaagtatttatctatcattgaatcagctttaaatcca
catgcggtctcaagggtgggcgcaaccggtccttggcaatttatgtttgctacggcaaaa
gcgtttaatttaaatatagacaactacgttgatgaacggaaagacccctatgccgcgact
tatgcagcggcggcttatctaaaagatgcttacaacgaatttggcgattggcaacttgca
atagcatcctataattgcggaaaaggaaatgtagccagagcgatacaacgctcaggtatt
gaaaaacctgatttttggaccgtgcgaaaatatcttccccaggaaacacgtaattatgtg
cccgcttttattgccatgaccttcgtgctaaacaactatgaagtattaggaattgcaaca
ccctccgggagcggatctgcccttacagcggagaaaggtaccgacgtcattttgatcgat
aagtttattccattatcaggcattgcagaggcgttaaacctcgacctgaaccaattgatc
acgctaaatccggcctataaaaagagcatcatcaatggtacaccggaggctccgaagcgt
ttagtcgtccctgcggtagataaaaccgcttatgccagcttgtatgcagctttaaataca
ccgaccgatgctcctgcaaaagttattacagcatctaacaccgatagaaaagctatttat
catcgcgtaagaagaggtgaaagcttaagctcaattgccaataaatatcaagtcgaggta
caggacttgaaggtttggaataggttgaggagaaatgccattgttccgggacagcgttta
aagatctccgaaccgggttatgcagcagggaaaaaaacgagcttggaaagaaaatccgtt
aattacgtaacctataaagttaaaagaggagatacactttccggaatcgcccaaaaatac
agaggagccactgtcaataatataaaagcaatgaacaatttaaatggctcatctatcaaa
ccagggatgactttaaagatcaatagcctttaa
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