Olivibacter sp. LS-1: FKG96_05650
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Entry
FKG96_05650 CDS
T06195
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
oli
Olivibacter sp. LS-1
Pathway
oli03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
oli00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FKG96_05650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oli03021
]
FKG96_05650
03400 DNA repair and recombination proteins [BR:
oli03400
]
FKG96_05650
Enzymes [BR:
oli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FKG96_05650
Transcription machinery [BR:
oli03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FKG96_05650
DNA repair and recombination proteins [BR:
oli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FKG96_05650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RAD51D_N
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QEL00313
UniProt:
A0A5C0ZGS3
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All DBs
Position
1365774..1366766
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AA seq
330 aa
AA seq
DB search
MAILAFQKPDKVIMQKSTDFDGTFEFRPLEPGFGVTIGNALRRILLSSLEGYAITSVRFS
GVSHEFSTITGVVEDVTEIILNLKQVRFKKTGESGDSEKIFVVINGQDQFKAGDITSHSN
NFTVLNPDLVICNMESSVTLEVELTVNKGRGYVNAEENKVADAAVGVIAIDSIYTPIKNV
KYTIENFRVEQKTDYEKLLLDISTDGSIHPEDALKEAAKILIHHFMLFSDENILLESQTK
EETKEVDEEILHMRKILKTELVDLDLSVRALNCLKAADIRSLAELVSYDVADMLKFRNFG
KKSLTEIQELVKSKGLSFGMNLSKYKLDEE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcttagcatttcagaaaccggataaagttattatgcaaaaatccacggatttt
gacggaacgtttgaatttcgaccgttagagccgggtttcggtgtaaccataggtaatgct
ctacgccgtattttgttatcttcattagaaggttatgcaattacttctgttcgtttctcc
ggtgtctcacatgaattttctaccatcactggggtagtagaggatgtgactgagattatc
ctgaatcttaaacaggtacgttttaagaaaacaggagaatcaggagattcagaaaagatt
tttgttgtaatcaacggtcaagatcaatttaaagctggagatattaccagtcattctaac
aactttactgtactcaatcctgacttggttatttgtaatatggagagctctgtaactttg
gaagtagagttaaccgtaaacaaaggccgtggttatgtcaatgctgaagagaataaagtt
gccgatgcagcagtaggggttatcgcaattgactctatctatacaccgatcaagaatgtg
aaatatacgatcgagaacttccgtgtagagcagaaaacagattacgagaagcttttattg
gatatttctactgatggttcaatccatccggaagatgcattgaaagaagctgctaaaatc
ttaattcatcactttatgttattctcggatgagaacattctattggaatctcaaacgaag
gaggagacaaaagaggtggatgaggaaatcttgcatatgcgtaagatcttgaaaactgaa
ttggttgacttagatctttctgtacgtgcattaaattgtttaaaagctgctgacatccgt
agcttagccgagttggtttcttatgatgtagctgatatgcttaagtttagaaacttcggt
aaaaaatctcttacagagattcaagaacttgtaaaatctaaaggtttgtccttcggtatg
aatttgtcgaaatacaaactggatgaagaataa
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