Olivibacter sp. LS-1: FKG96_08885
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Entry
FKG96_08885 CDS
T06195
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
oli
Olivibacter sp. LS-1
Pathway
oli00550
Peptidoglycan biosynthesis
oli01100
Metabolic pathways
oli01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
oli00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FKG96_08885 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FKG96_08885 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
oli01011
]
FKG96_08885 (mrdA)
Enzymes [BR:
oli01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
FKG96_08885 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
oli01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
FKG96_08885 (mrdA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QEL00917
UniProt:
A0A5C0ZHR8
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All DBs
Position
complement(2238717..2240690)
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AA seq
657 aa
AA seq
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MNNSFFERKYVVQGIFIIAAFLLACRLFYLQIIDDSYILSANNNVLRKVVIYPARGVILD
RNGKILVQNEPVYDLMVTPREVKPFDTLALCELIGIDKEGFDKRYQKAVNFSPYRASIFE
KQLSAQTYARLQEKLFQFRGFYVQNRTVRSYPDSVAAQFLGYINEVTEKDIERSNNFYRP
GDYIGVSGVERAYEELLRGQRGVQNLMVDAFNRPKGHFMDGKYDTLAVAGEGLVSSLDLE
LQKLAEKFMKNKRGSVVAIEPSTGEILAFASTPSYDPNLMVGRERGNNYMKLLNDPNKPM
FIRPIQAQYPPGSVFKVVSALVAQQAGMIDEHTRWNCPGGYSYGGGRGFMRCTHVHGTID
LPAAIQGSCNTYFGHVYARMIDQRKMKSTKAYSLWRDAIMKFGVAQELGVDLPNEKKGLL
PTADFYSKRYGNDKWGSGYNISNSIGQGEVEITTLQMANIMAIVANRGYYFRPHLIKSIG
EKKVVKKEFIEKIPVGIDQKYFEPVIEGMSRVVKYNANIRIPDIEMCGKTGTAQNPHGKH
HSVFFAFAPRVNPKIAIAVFVENVGYGATYAAPIASMMVEKYLKDTISMSKAVQERVLKE
SNLIVPEPPKNTTEPVISKANGNKPQSRKRESYVKHNEVAVINELKRRIEYKNSEGR
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgaataacagtttttttgaaagaaagtacgtcgttcaaggaatctttataatagctgcc
tttttattggcttgtcgacttttttatctacaaatcatcgacgattcgtatatactctct
gcaaacaataacgtattaagaaaagttgttatctatcccgctagaggcgttattttagat
cgaaatggcaaaatattggttcaaaacgaaccggtttacgatctaatggtcactccaaga
gaggtcaagccttttgacaccttggcactttgcgagctgatcggtattgacaaagaaggc
tttgataagcgttatcaaaaagctgtcaacttttctccctatcgtgcatccatatttgaa
aaacaattatcagcgcaaacgtacgccagactacaggagaaattattccaattcagggga
ttctacgttcaaaatcgaacggtacgaagctatccggattcggttgccgctcaatttctg
ggctatatcaatgaagttacggaaaaagatattgagcgatccaataacttttaccgtcct
ggtgattacatcggagtaagcggggtggagcgtgcttatgaagaactattaagaggccaa
cgcggagtacagaatttaatggttgacgcctttaatcgtccaaagggacactttatggat
ggaaagtacgacaccctcgcggtcgcaggagaaggccttgtctcttctcttgatttagaa
ttgcaaaaacttgctgaaaagttcatgaagaataagcgtggctcggtagttgccatagaa
ccctcaacaggagaaattttggcctttgccagtaccccaagctacgatccgaatctaatg
gtggggagggaacggggtaataattacatgaagttgctgaatgatcccaataaacctatg
ttcattcgccccattcaggctcaatatcctccaggatcagtgtttaaggttgtaagtgca
ctcgtagcgcaacaggcaggcatgatcgatgagcatacccgatggaattgtcccggtggt
tacagttatggaggaggtagaggctttatgcgctgtacccacgttcatggcacgatcgat
cttcctgcagctattcaaggctcttgcaatacttattttggccatgtatatgcaagaatg
attgatcaacgaaaaatgaagtcaactaaagcctattcactttggcgagatgctatcatg
aaatttggtgtcgcccaggaattgggcgtcgatcttccaaatgagaaaaagggacttctt
ccgacggccgacttctattccaaacgttatggaaacgataaatggggttcaggatacaat
atctcaaactccattggacaaggagaggttgaaattaccactttacaaatggccaatatc
atggcaatcgttgccaaccgagggtattactttcgaccgcacctgataaaatccatcgga
gaaaaaaaagtagtaaagaaggagtttattgagaaaatacctgttggcatcgaccagaaa
tactttgagccggttatagaaggaatgagccgcgtcgttaaatataatgccaatattcga
atcccggatatagaaatgtgtggaaaaaccggtacagctcaaaaccctcacggtaaacac
cactccgttttctttgcttttgctccaagggtaaatccaaaaattgccattgctgttttc
gtagaaaatgtaggctatggtgcaacctatgcagcgccaatagcaagtatgatggttgaa
aaatacctaaaagataccatcagcatgtctaaagctgtacaagaaagagtattgaaagaa
agcaatttaatcgtgcccgagcctcctaaaaatactacggaaccggttatcagtaaagca
aacggcaataaaccgcaatcaagaaagcgcgaaagctatgttaaacataatgaagtggca
gttattaatgaattgaaaaggcgcatcgaatacaaaaacagcgaaggaagataa
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