Olivibacter sp. LS-1: FKG96_09335
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Entry
FKG96_09335 CDS
T06195
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
oli
Olivibacter sp. LS-1
Brite
KEGG Orthology (KO) [BR:
oli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oli03032
]
FKG96_09335 (gyrB)
03400 DNA repair and recombination proteins [BR:
oli03400
]
FKG96_09335 (gyrB)
Enzymes [BR:
oli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FKG96_09335 (gyrB)
DNA replication proteins [BR:
oli03032
]
Prokaryotic type
DNA Topoisomerases
FKG96_09335 (gyrB)
DNA repair and recombination proteins [BR:
oli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FKG96_09335 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QEL01001
UniProt:
A0A5C0ZMW8
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All DBs
Position
2335255..2337213
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AA seq
652 aa
AA seq
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MSEENKNKSNYSADNIQVLEGLEAVRKRPSMYIGDVGVKGLHHLVYEVVDNSIDEALAGY
CTDIHVIIHKDNSITVEDNGRGIPTGINKKENKSALEMVMTMLHAGGKFDKDTYKVSGGL
HGVGVSCVNALSTLLIAEVHREGKIFKQEYAQGKPLYDVKVIGETDRTGTNVTFHPDPSI
FTMTTTYSYDTLAGRLRELAYLNKGIRLTLLDEREEQEDGALRHEEFYSEGGLSEFVKFL
DGNRQPLIPDPIHVEGIKQGIPVELALQYNDTYSENVHSYVNNINTIEGGTHVAGFRRGL
TRTLKAYADKSGLLKNLKVEITGDDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMGAV
DVAVGEILGTYLEENPREAKAIVQKVIIAAQARAAARKARDMVQRKTVMGGSGLPGKLAD
CANNDPAKCEIYLVEGDSAGGTAKQGRNREFQAILPLRGKILNVEKAMEHKIYENEEIKN
MFTALGVSIGTPEDAKALNLEKLRYHRIIIMTDADVDGSHITTLILTFYFRYMKELIERG
YVYIATPPLYLVKKGKEHEYAWNENQRLAAIQRLKGAGKEDSVHVQRYKGLGEMNAEQLW
DTTMNPETRTLRQVSIENAAECDRVFSMLMGDEVAPRREFIERNAKYAKIDV
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaaaacaaaaacaaatccaactattccgcagataatatacaggtattagag
ggcttagaagccgtaagaaaaagaccgtcaatgtatatcggagacgttggcgtgaaaggt
ttgcaccacttggtgtatgaagtagttgataactccattgatgaagcgctagccggttac
tgtacagacattcatgtaatcattcataaagataactccataacagtggaggataacgga
cggggtatcccaaccggaatcaataaaaaagagaacaaatcagccttggaaatggtcatg
actatgctccatgccggtggtaagttcgataaggacacctataaggtttccggtggttta
catggtgttggtgtttcctgtgtgaatgcactctctaccttgttgatagctgaagtacat
cgggaaggtaaaatatttaaacaagagtatgcgcagggaaaacctctgtatgatgtaaaa
gtaattggtgaaaccgatcgtaccggaacgaatgttactttccatccggatccaagtatt
tttaccatgactaccacgtatagttatgatacgcttgccggtagattgcgtgagttggct
tatttaaacaaaggaatcagacttaccctacttgacgaacgcgaggagcaagaagatgga
gcattacgtcatgaagagttttattctgaaggtggcctgagcgagtttgttaaatttttg
gatggtaaccgtcagcctctaattcctgaccccattcatgtggaaggaataaaacagggt
ataccggtagagttagctttgcaatataatgatacctattccgaaaacgtgcactcctac
gtgaacaatatcaataccattgaagggggtactcatgttgccggatttaggagaggctta
acccgtactttgaaagcttatgcagataaatcgggcctgttaaagaacctaaaggtagaa
attacaggtgatgattttcgagaaggcttaacggctgttatttctgtaaaggtcgctgag
ccgcagtttgaaggacaaacaaaaaccaaactcgggaacaacgaagtaatgggcgccgta
gatgtcgctgtaggcgagattttgggtacttacctggaagaaaatccacgcgaagcaaag
gcaattgtacagaaggttatcatcgcggctcaagctcgcgccgctgcacgcaaagcccgt
gatatggtgcagcgcaaaacggtaatgggaggtagcggtttgccgggtaagttggccgat
tgcgcaaacaatgatcctgctaaatgtgaaatatacctcgtagagggagactcggcggga
ggaaccgcaaaacaggggagaaacagggaatttcaggcaatcctgcctttgcgtggtaaa
atcctcaacgtagaaaaagcgatggagcataaaatctacgagaacgaggaaattaagaat
atgtttaccgccctaggggtgagtatcggtactcctgaagatgcgaaggcgctgaatctg
gaaaaacttcgttatcatcgaatcattatcatgacggatgccgatgtggacggttcgcat
attacaacgttgattttgaccttctatttccgttatatgaaggaattaatagagcgaggt
tatgtctacattgctactcctccgttgtacttagtaaaaaaaggtaaagaacatgagtac
gcgtggaatgaaaatcaacgactggcagctattcaacggttgaaaggtgccggtaaagag
gatagcgtacatgttcagcggtataaaggtttgggagagatgaacgcagagcagttgtgg
gatactaccatgaaccccgaaacccgcaccttacgtcaggtgagtatagaaaatgcggcg
gagtgcgaccgtgtcttttccatgttaatgggcgatgaagtggcacctcgtcgggagttt
attgagcgtaacgctaaatatgcgaagatagacgtataa
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