Olivibacter sp. LS-1: FKG96_09385
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Entry
FKG96_09385 CDS
T06195
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
oli
Olivibacter sp. LS-1
Pathway
oli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FKG96_09385 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oli03400
]
FKG96_09385 (ruvB)
Enzymes [BR:
oli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FKG96_09385 (ruvB)
DNA repair and recombination proteins [BR:
oli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FKG96_09385 (ruvB)
RecFOR pathway proteins
FKG96_09385 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
AAA_22
Rad17
Mg_chelatase
TIP49
AAA_16
TsaE
nSTAND3
NB-ARC
AAA_PrkA
AAA_14
AAA_18
Sigma54_activ_2
AAA_33
NPHP3_N
Bac_DnaA
RNA_helicase
TniB
NTPase_1
NACHT
ABC_tran
DUF815
AAA_28
AAA_17
Motif
Other DBs
NCBI-ProteinID:
QEL01011
UniProt:
A0A5C0ZMX7
LinkDB
All DBs
Position
complement(2348775..2349797)
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AA seq
340 aa
AA seq
DB search
MNEHLNPNAEHLSKTEKEVEKVLRPQAFEDFTGQHKILENLRIFVQAAKLRGEALDHVLL
HGPPGLGKTTLSHIIANEMGVGIKITSGPVLDKPGDLAGLLTNLEVGDILFIDEIHRLSP
LVEEYLYSAMEDFKIDIMLETGPNARSVQLSLSPFTLVGATTRSGLLTAPLRARFGINAR
LQYYDAKLLTTIVLRSAGILRTPISEEGAYEIARRSRGTPRIANALLRRTRDFAQIKGNG
NIDTKIAQYALNALNVDEHGLDEMDNRILLTIIDKFKGGPVGLKTIATAVGEDEGTIEEV
YEPFLIQEGYIMRTSRGRECTELAYKHLGKANYPKGNTLF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaacatttaaatcccaatgcagagcacctcagcaagacggagaaagaggtagaa
aaggtgttgcgcccccaggcatttgaagattttaccgggcaacacaaaatattggaaaat
ttacggattttcgttcaagcagctaaacttcgtggcgaggcgttagaccatgtactcctt
cacggccctcccggattaggaaagacaacactttcacatattattgcgaatgaaatgggc
gtgggcattaagattacttccggaccggtattagataaacccggtgatctagctggccta
cttaccaatttagaagtgggtgatatcctgttcattgatgaaatccatcgcctgagcccc
ttagtagaagagtatctttattcggcgatggaagatttcaaaattgacatcatgctcgaa
accggaccaaatgcccggtctgtgcaattatccctcagtccttttacccttgtgggggcc
acaacccgatcaggcttgttaacagcgccacttcgcgcccgctttggcattaatgcgcgt
ttgcaatattatgatgccaaactcttaacaaccatcgtacttcggtctgccgggatatta
cggacaccaatcagcgaagaaggtgcctatgaaatcgccaggagaagccgtggcacccca
cggattgccaatgccttgctacgaagaacccgtgacttcgcccaaatcaagggaaatggc
aatatcgatacgaaaattgcccaatacgcgctcaacgcgctcaatgttgatgagcatgga
ttggacgaaatggataatcggattttattgaccataatcgataaattcaaaggagggccg
gtaggactgaaaaccatcgctactgcagtaggagaagatgaagggacgatcgaagaggta
tatgaaccttttcttattcaggagggctatattatgcgaacttcaagaggccgcgaatgt
accgaactggcctacaagcatctgggaaaagcaaactatcccaaaggaaatacgttattt
tag
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