Olivibacter sp. LS-1: FKG96_13980
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Entry
FKG96_13980 CDS
T06195
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
oli
Olivibacter sp. LS-1
Pathway
oli03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FKG96_13980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oli03400
]
FKG96_13980
Enzymes [BR:
oli01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FKG96_13980
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FKG96_13980
DNA repair and recombination proteins [BR:
oli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FKG96_13980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Ribosomal_S13
NFACT_N
Fapy_DNA_glyco_C
Motif
Other DBs
NCBI-ProteinID:
QEL01867
UniProt:
A0A5C0ZKL1
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All DBs
Position
3430529..3431305
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AA seq
258 aa
AA seq
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MPELPDLEVFSRNLTRILKGKKLERIHVHEHKKVSVPEKELKEALEKRELKKVYRLGKQL
YFDFGKNTLLSLHLMLHGKLVYTNEENPKYALLSLKFEKAQTLFITDFQKMAHIQLNPKR
TASVDALSDDLHAERLYMILQNSKATIKTLLMDQHIIGGIGNAYADEILWEAKIAPQSIA
NKIPKEKVSELVESIKEVLLQAEKMILKEHPDIISGEIRDFMKVHRVKAKEDPQGNPIRT
EKIGGRTTYFTDRQHVYA
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattacccgatttagaggtttttagtagaaaccttacgagaatccttaagggg
aaaaaactggaacggatacatgttcatgagcataaaaaagtcagtgttccggaaaaagag
ctcaaagaagctttggaaaaacgtgaattaaagaaagtatatcgcttaggaaaacaactt
tatttcgatttcggaaaaaatacgttattatctcttcatttaatgcttcacggtaaactg
gtatataccaacgaagaaaaccctaagtatgccctattatccttgaaattcgaaaaggct
caaacgctcttcataacagactttcaaaagatggcccatattcagctaaatccgaagcgg
acagcgtcggtagatgctttgtcggatgatctgcatgcggaacgactgtatatgatcctt
caaaacagcaaggcaactataaaaacacttctaatggatcaacatataatcggtggtatt
ggaaatgcctatgcggatgaaattctttgggaggcaaagattgcaccgcaatctatcgcc
aataaaataccaaaagaaaaagtaagcgaattagtggaaagtattaaagaagttttattg
caggcggaaaaaatgatattaaaagaacaccccgatatcataagcggtgaaattcgcgat
tttatgaaggttcatcgtgtgaaggccaaagaagatccacaaggtaatccgatccgaacg
gaaaagataggcggcagaactacttatttcacagatcgccaacatgtctacgcttaa
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