KEGG   Olivibacter sp. LS-1: FKG96_13980
Entry
FKG96_13980       CDS       T06195                                 
Name
(GenBank) Fpg/Nei family DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
oli  Olivibacter sp. LS-1
Pathway
oli03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:oli00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    FKG96_13980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oli03400]
    FKG96_13980
Enzymes [BR:oli01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     FKG96_13980
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     FKG96_13980
DNA repair and recombination proteins [BR:oli03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     FKG96_13980
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco Ribosomal_S13 NFACT_N Fapy_DNA_glyco_C
Other DBs
NCBI-ProteinID: QEL01867
UniProt: A0A5C0ZKL1
LinkDB
Position
3430529..3431305
AA seq 258 aa
MPELPDLEVFSRNLTRILKGKKLERIHVHEHKKVSVPEKELKEALEKRELKKVYRLGKQL
YFDFGKNTLLSLHLMLHGKLVYTNEENPKYALLSLKFEKAQTLFITDFQKMAHIQLNPKR
TASVDALSDDLHAERLYMILQNSKATIKTLLMDQHIIGGIGNAYADEILWEAKIAPQSIA
NKIPKEKVSELVESIKEVLLQAEKMILKEHPDIISGEIRDFMKVHRVKAKEDPQGNPIRT
EKIGGRTTYFTDRQHVYA
NT seq 777 nt   +upstreamnt  +downstreamnt
atgccggaattacccgatttagaggtttttagtagaaaccttacgagaatccttaagggg
aaaaaactggaacggatacatgttcatgagcataaaaaagtcagtgttccggaaaaagag
ctcaaagaagctttggaaaaacgtgaattaaagaaagtatatcgcttaggaaaacaactt
tatttcgatttcggaaaaaatacgttattatctcttcatttaatgcttcacggtaaactg
gtatataccaacgaagaaaaccctaagtatgccctattatccttgaaattcgaaaaggct
caaacgctcttcataacagactttcaaaagatggcccatattcagctaaatccgaagcgg
acagcgtcggtagatgctttgtcggatgatctgcatgcggaacgactgtatatgatcctt
caaaacagcaaggcaactataaaaacacttctaatggatcaacatataatcggtggtatt
ggaaatgcctatgcggatgaaattctttgggaggcaaagattgcaccgcaatctatcgcc
aataaaataccaaaagaaaaagtaagcgaattagtggaaagtattaaagaagttttattg
caggcggaaaaaatgatattaaaagaacaccccgatatcataagcggtgaaattcgcgat
tttatgaaggttcatcgtgtgaaggccaaagaagatccacaaggtaatccgatccgaacg
gaaaagataggcggcagaactacttatttcacagatcgccaacatgtctacgcttaa

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