Olivibacter sp. LS-1: FKG96_15660
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Entry
FKG96_15660 CDS
T06195
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
oli
Olivibacter sp. LS-1
Brite
KEGG Orthology (KO) [BR:
oli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oli03032
]
FKG96_15660
03400 DNA repair and recombination proteins [BR:
oli03400
]
FKG96_15660
Enzymes [BR:
oli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FKG96_15660
DNA replication proteins [BR:
oli03032
]
Prokaryotic type
DNA Topoisomerases
FKG96_15660
DNA repair and recombination proteins [BR:
oli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FKG96_15660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QEL02182
UniProt:
A0A5C0ZM71
LinkDB
All DBs
Position
complement(3819938..3820996)
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AA seq
352 aa
AA seq
DB search
MLKVSKQQLRYCNDSSDGYTRVKKGKGYCYLDINKKPIVDKELIKRIKSLVIPPAWKNVW
ISPYDNGHLQATGLDDKGRKQYLYHPLWNETREKHKINRILAFGKVLPSLREAITADCRQ
RNLGKDRVSAIALSIMENTLMRAGNDRYRRENNSYGLTTLRSRHVKIEGQIVTFNFTGKK
GKKHNIKLSNRSLTKRLRQVMEIPGQEVFQYYNDDQEICSLDSGDLNEYIQRHTGQNFTS
KDFRTWYATLWAFKYLLELSTEEQQVKSYKKNLNACLDFVAKKLGNTRAVCRASYVCNDL
IDAYLAGSLQSYLRKTTSDEVKSLPIHEVEPLLITFLHNLKKSQQILLRLTS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaagtaagcaagcagcagttgcgctattgtaatgatagttctgatggttatact
cgggtaaaaaaggggaagggatattgctatttagacatcaataaaaagccgatcgttgat
aaagaattaataaaaagaataaaaagtttagtgattccgccagcttggaaaaacgtttgg
ataagtccttacgataatggccaccttcaggccaccggattggacgataaggggagaaag
caatacttatatcacccgctatggaacgaaacaagagaaaaacacaaaattaatcgtatc
ctcgcctttggaaaggtactaccatcattgagagaggcgattacggctgattgcagacaa
cgaaaccttggtaaagaccgcgtttctgccattgcactcagcatcatggaaaacactctt
atgcgcgccgggaacgaccgctatcgacgggagaataacagttatggattgacgacctta
cgaagtcgacatgtaaaaatagaaggacaaattgttacttttaactttacaggaaaaaag
ggcaaaaagcacaacattaaactcagtaatcgtagtttgactaagagacttcgtcaggtt
atggaaattccaggccaagaggtttttcaatattataatgacgatcaggaaatctgctcc
ttagattccggcgatttaaatgaatatatccaaaggcacaccggacagaactttacgtca
aaggattttagaacatggtatgcaaccttatgggcttttaagtacctacttgagctaagc
actgaagagcaacaggtgaagtcttataaaaagaacctaaatgcctgtctcgatttcgtt
gctaaaaaattgggaaacacaagagccgtatgtagagcttcatatgtttgtaatgactta
attgacgcctatttagcgggcagcttgcaaagctatcttcgcaaaactactagcgatgaa
gtgaaatcgctgcctattcatgaagtcgaaccactcttgataacatttcttcataactta
aagaaaagccagcaaatcctattgagattaacttcttga
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