KEGG   Olivibacter sp. LS-1: FKG96_15970
Entry
FKG96_15970       CDS       T06195                                 
Symbol
nirD
Name
(GenBank) nitrite reductase small subunit NirD
  KO
K00363  nitrite reductase (NADH) small subunit [EC:1.7.1.15]
Organism
oli  Olivibacter sp. LS-1
Pathway
oli00910  Nitrogen metabolism
oli01100  Metabolic pathways
oli01120  Microbial metabolism in diverse environments
oli01310  Nitrogen cycle
Brite
KEGG Orthology (KO) [BR:oli00001]
 09100 Metabolism
  09102 Energy metabolism
   00910 Nitrogen metabolism
    FKG96_15970 (nirD)
Enzymes [BR:oli01000]
 1. Oxidoreductases
  1.7  Acting on other nitrogenous compounds as donors
   1.7.1  With NAD+ or NADP+ as acceptor
    1.7.1.15  nitrite reductase (NADH)
     FKG96_15970 (nirD)
SSDB
Motif
Pfam: Rieske_2 Rieske Rieske_4 zf-CCCH_9
Other DBs
NCBI-ProteinID: QEL02244
UniProt: A0A5C0ZMD5
LinkDB
Position
complement(3892201..3892617)
AA seq 138 aa
MQKIDYLSYKPSDEQHVDHWLKVGTSDEFPENGGLCFKHRELQIAVFNFTNRNEWYACQN
LCPHKMQMILSRGMIGSQQGEPKVACPFHKKTFSLKTGECLNGDECHITTFPVKEINGEI
YVGLIERAEHAIQQDLKV
NT seq 417 nt   +upstreamnt  +downstreamnt
atgcaaaaaatagattatttgagttataaaccatccgacgaacaacatgtagatcattgg
ttgaaggttggtaccagtgatgagtttccggaaaacggcgggctgtgcttcaagcacaga
gagctccagattgccgtatttaatttcactaatcggaatgaatggtatgcgtgccaaaac
ctttgccctcataaaatgcagatgattttatcgagaggcatgatcggctcgcagcaagga
gaacctaaagtggcttgtccctttcataaaaaaaccttttcattgaaaacaggcgaatgt
ctaaacggagacgagtgccatataaccacctttcctgtcaaagagatcaacggggaaata
tatgttgggttaatagaaagagcagaacatgcaattcagcaggacctgaaagtatag

KEGG   Olivibacter sp. LS-1: FKG96_15975
Entry
FKG96_15975       CDS       T06195                                 
Symbol
nirB
Name
(GenBank) nitrite reductase large subunit
  KO
K00362  nitrite reductase (NADH) large subunit [EC:1.7.1.15]
Organism
oli  Olivibacter sp. LS-1
Pathway
oli00910  Nitrogen metabolism
oli01100  Metabolic pathways
oli01120  Microbial metabolism in diverse environments
oli01310  Nitrogen cycle
Brite
KEGG Orthology (KO) [BR:oli00001]
 09100 Metabolism
  09102 Energy metabolism
   00910 Nitrogen metabolism
    FKG96_15975 (nirB)
Enzymes [BR:oli01000]
 1. Oxidoreductases
  1.7  Acting on other nitrogenous compounds as donors
   1.7.1  With NAD+ or NADP+ as acceptor
    1.7.1.15  nitrite reductase (NADH)
     FKG96_15975 (nirB)
SSDB
Motif
Pfam: Pyr_redox_2 NIR_SIR Fer2_BFD Pyr_redox NIR_SIR_ferr Pyr_redox_3 Rubredoxin_C FAD_binding_2 GIDA AlaDh_PNT_C Lys_Orn_oxgnase NAD_binding_8 FAD_binding_3 VWA_N2
Other DBs
NCBI-ProteinID: QEL02245
UniProt: A0A5C0ZPT9
LinkDB
Position
complement(3892636..3895137)
AA seq 833 aa
MKIIIVGNGMVSYKFCEKIRKKSNSNHIEITVYGEEHRPAYDRVHLSEYFSGKSADDLLL
APTGWYNEHHIKLVTGELVTEIDPTKKKITTHKGTSDSYDKLILATGSSPFIPPLHGIDK
TGVFAYRTIEDLQQMEIYGKTAKKAVVIGGGLLGLEAAKALLDMGLETHIVEFADRLMPR
QLDVRGAFILRNKLSALGLHIHTSKSTKEILGTDKIAGLAFADGSILDCDMLVISAGIRP
RDELASKSGIQTGSRGGILVDNHLQTNFPDIYAIGEVALHNEMIYGLVAPGYEMAEVVAS
RLCGDYDKSFTGFDMSTKLKLIGVDVASFGDALDPEEECVPIVFENKAKGVYKRINVTRD
GKYLKGGILVGEADSYNMLLQIAQNGLPLPEDPADLILGSRSAGQSSGQGVDSLPDTAQI
CSCEGISKGNICEAIAKDELTDLAGIKKATKACTGCGGCTPLVADLLKSVLESQGKVVKK
TLCEHFAYTRQELYDLIKIQNIKSYSELLGRYGEGDGCEVCKPAVASLLASIWNEVILKQ
STIQDTNDRFLANIQKGGSYSVVPRIPAGEITPDKLLVIAQVAKKYNLYTKITGGQRIDL
FGAQLHELPAIWEELIAAGFESGHAYGKSLRTIKSCVGSTWCRFGVQDSVGFAIEIENRY
KGLRAPHKLKGAVSGCIRECAEAQSKDFGIIATEKGWNLYVCGNGGARPQHAQLLIGDID
KDSCIRYLDRFLMYYIKTAEPLTRTATWLNKLEGGLPYLYDVVVNDVLGIGAELEVEMES
LIANYECEWKHAVENESIRRRFKHFANSDEGDPFLQFEELRGQRIPTNWNVIV
NT seq 2502 nt   +upstreamnt  +downstreamnt
atgaaaattattatcgttggaaatggcatggttagttacaagttttgcgaaaaaatacgt
aaaaaatcaaacagtaaccacatcgaaattaccgtttatggagaagaacatcgtcctgcg
tacgatagagttcatctgagtgaatatttttcgggaaaatcagccgacgatttgctgttg
gcacctaccggctggtacaatgaacatcatattaaattggtgactggggagttggttacc
gaaattgatccgacaaaaaagaaaataaccactcataaaggaacaagcgatagttacgat
aaacttatactggcaaccggttcatctccttttatcccccctttgcatggaatcgataaa
acgggcgtttttgcctaccgaactatcgaggatttacaacagatggagatctacggcaaa
acagcaaaaaaagcagttgtcataggtggtggcctgttgggattagaggcagctaaagcc
ttgctggatatgggactggaaacgcatattgtggaatttgcagaccgcttaatgccacgt
caattagatgtaaggggagccttcatattgcgcaataagttatcagcgctcggcttacac
atacatacgtcaaaaagcaccaaggaaatattaggaactgacaaaatcgctggacttgcc
tttgcagatggaagtatattggattgtgatatgttggttatttccgccgggataagaccc
cgggatgaattggcttctaaaagtgggatacaaacgggcagcaggggtggaattttggta
gataatcatttgcaaaccaatttcccggatatctatgcgatcggagaggtggcattacat
aatgaaatgatctatggattagtagccccaggttacgaaatggccgaagtcgtggcttcc
aggctatgtggggactatgacaaatcatttaccggctttgacatgtcaactaaacttaaa
ttaataggtgttgatgttgcaagttttggagacgcactggatccagaagaggagtgtgtt
cccattgtttttgaaaataaagcgaagggtgtctacaaaagaattaatgtaacaagagat
ggtaagtaccttaaaggaggaattctggtaggcgaggcggattcttataacatgctttta
caaattgcacaaaacggtttgcctttaccggaagatcctgctgatttgattctgggaagt
cgcagtgcgggacaaagcagtggacagggcgtcgattccttgcccgataccgctcaaatc
tgctcctgcgagggaattagcaaagggaacatttgtgaggcgattgcaaaagatgaattg
actgatttagcaggaataaagaaagccacgaaggcctgcacaggatgtggcggatgcaca
cccctggtggctgatcttttaaaatctgttttggaatctcaaggtaaggttgtcaagaaa
acactatgcgagcactttgcctatacaagacaagaactatacgacctcattaaaattcaa
aatataaagagctatagcgagcttttgggtcgttatggcgaaggtgacggatgcgaggtc
tgcaaaccggcagtagcatcgttgcttgccagcatatggaacgaagttattcttaaacaa
agtaccatacaagatacgaacgatcgtttcttagccaatatccagaagggtggctcttat
tcggtagtaccaagaatacctgcaggggagattacgccggataaactactagtaattgcg
caggtagcaaagaagtataacctctacacgaagattaccggtgggcaacgtatagaccta
tttggcgcccaattgcacgagcttcccgccatttgggaagagcttattgcagccggtttt
gaaagcggtcatgcttatggaaagtcgctaagaaccataaaaagctgtgtcggatcaact
tggtgccgattcggcgtgcaggattcagttggttttgccatagaaatagaaaatcgctat
aagggtttacgagcgcctcacaagttaaaaggagcggtttccggttgtatacgcgagtgt
gcagaagctcaatccaaagattttggaattattgcaacagagaaaggatggaatttatat
gtctgcggcaatggtggagcaagaccgcagcatgcgcaattgctgattggagatattgat
aaagatagttgtatacgctatttagaccgcttcctgatgtactacattaaaacggctgaa
ccgctcacacgtacggctacttggttgaacaagttagaaggcggactaccttatttatat
gatgtggtcgttaatgatgtgctgggtataggagctgaactggaagttgagatggaaagc
ttaattgcgaactatgaatgcgaatggaagcatgctgtcgaaaacgaatcaataaggaga
cgattcaaacattttgctaatagtgacgaaggcgatcctttcctgcaatttgaggagctt
cgtggacaacgaattcctactaactggaatgttattgtgtaa

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