Olivibacter sp. LS-1: FKG96_16385
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Entry
FKG96_16385 CDS
T06195
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
oli
Olivibacter sp. LS-1
Pathway
oli03420
Nucleotide excision repair
oli03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FKG96_16385
03430 Mismatch repair
FKG96_16385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oli03400
]
FKG96_16385
Enzymes [BR:
oli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FKG96_16385
DNA repair and recombination proteins [BR:
oli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FKG96_16385
MMR (mismatch excision repair)
Other MMR factors
FKG96_16385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
DEAD
ResIII
Pex19
AAA_7
AAA_14
Motif
Other DBs
NCBI-ProteinID:
QEL02320
UniProt:
A0A5C0ZLL5
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All DBs
Position
complement(3975060..3977249)
Genome browser
AA seq
729 aa
AA seq
DB search
MDPTNDDKNKRDDREGQSVDLDRLLDGLLFDTNIVSYSKQKKEGLKDLLSKPLRVENFDT
QIPTYLRTLMDAAKHIDEKLVDIYRIYDLSNLKINYKKELNPQQLAAVCTLDKPLLVIAG
AGTGKTRVITYKVSYLIEKGFEPNEILLLTFTRKSANEMLNRVQKLLHAKSITNVLGGTF
HSFANYALRKYHALVGLPPNFTIIDGEDVVDIISLLKTELNLTPKKGSKHFPKSSTIQSI
FSKAKNHELGIENVIAEYFPEYERFVKDFQRIYTLLAAYKQRSNLMDYDDLIDILRDKLK
TNTHFRQVLQAKVAYILVDEYQDTNNIQREIVELLSQKGNITVVGDDAQSIYSFRGANFE
NILRFPQHFENCGVVKIEENYRSTQRILDFTNKLIESARIGFKKELFSRLHKGRKPRINR
LVDTTEEAAYIVDTVMTLKENDLEYSDFAILSRASWQSNFVQAELMKRNIPFIVVGGIKF
GERRHVKDMVSFLKIMMNPMDAVAWHRILKLLEGIGDVRAKEIIVKIHEQHGRIETNLFE
GKKHGEHLKELLDLFNRMQQLGSAPVDLIPPIYEFYKPLLKQLEDDFDAREIDLEIFAEI
AAKYEDLEKFLADFTLEPPSNRYQDKTIPFDESDEKPLTISTIHSAKGLEWHTVFVPFAL
DGILPSVRSMASLEEIEEERRLFYVACSRAKENLFITMPAYVSSWDAVFTKPSRFLYGIS
DNTYDIINE
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggatccgaccaatgacgataaaaataagcgggacgatagggaaggacagtcggtagat
ttggaccgtttgttggatggtttgctgtttgatacaaacatagtaagctactccaagcaa
aaaaaagaagggctcaaagacctattaagtaaacccctacgagttgagaattttgatacg
caaatccctacgtatctacggacattaatggatgctgcaaagcatattgatgagaagctt
gttgatatttaccgtatttatgatctttccaatcttaaaatcaactataaaaaagagcta
aatccacagcagttagctgcagtatgtaccctagataagcccttattggttattgcagga
gccggtacgggtaagacgcgtgttattacttataaagtaagctatctaattgaaaaggga
tttgaaccaaacgagattttgctgctcacttttacgaggaaatcggctaatgaaatgctt
aaccgggtacaaaagttgctgcatgccaagtctattacgaatgtactaggtggaactttt
cactcttttgctaattatgcattgcgaaagtaccatgctttagtcggccttccaccaaac
tttaccatcattgatggcgaggatgtggtcgatatcatcagccttctaaaaaccgaatta
aacttaacgccaaaaaaaggcagtaagcattttcctaaatcaagtacgattcagagtatc
ttctctaaagcaaagaatcatgaattgggtattgagaatgttattgccgaatattttccc
gaatatgagcgatttgtaaaagactttcagcgaatttatactttgctcgctgcatacaag
cagcggtcgaacttaatggattacgatgacttgattgatatattacgtgataaactaaaa
actaatacgcatttcagacaagtactacaggcgaaagtagcttacattttagtagatgag
tatcaagatacaaacaatattcaacgcgagatcgtggaattgttatcacaaaaaggaaac
ataacggttgtcggtgacgatgcacaaagtatctattcattccgtggagctaacttcgag
aatattcttcgtttcccacaacattttgaaaattgtggggtagtaaaaattgaggagaac
tatcggagtacacaacgcattttggattttacaaacaagctgatagaaagtgctcggatc
ggttttaaaaaagaattattttctcgattacataagggacgaaagcctcgcataaatcgg
ttagtcgatacgaccgaagaagcggcttatattgtggacaccgtcatgacactgaaggaa
aatgatttagaatattctgatttcgctatactaagcagagcgtcatggcaatccaatttt
gtacaagcagaattgatgaagaggaatattccattcattgtagtaggaggaataaaattc
ggtgaaagaagacatgtcaaggacatggtgtccttcctaaaaattatgatgaatccgatg
gacgccgtggcctggcatcgtattctaaagttgctcgaaggcattggagacgtacgcgca
aaagaaattattgttaaaatacatgagcaacacggtcgaattgaaactaatttgtttgaa
gggaaaaagcatggagaacatttaaaagaacttttagatctatttaatcgaatgcagcaa
ttaggttctgcacccgtcgatttaattcctccgatctatgaattttataaaccgctatta
aaacaattggaagacgattttgacgccagagaaattgatcttgagatatttgcagagatt
gcagctaaatacgaagatttagagaaatttttagctgattttacgttagagcctccatcc
aaccgatatcaggataagactataccctttgatgaaagtgacgaaaaacctcttacgatt
tcaacgatacattctgctaaaggtttggaatggcataccgtttttgttccgtttgccctt
gatggtatcttgccttcggtaagatcaatggcatctttagaagaaatagaggaggagcga
cgtttattttacgtcgcttgtagcagagccaaggaaaatttgtttatcacgatgccagct
tatgtttcttcttgggacgctgtatttacaaaaccgagtcgattcttatacggcatatca
gacaatacatacgatatcattaacgaatga
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