Olivibacter sp. LS-1: FKG96_16505
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Entry
FKG96_16505 CDS
T06195
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
oli
Olivibacter sp. LS-1
Brite
KEGG Orthology (KO) [BR:
oli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oli03400
]
FKG96_16505
DNA repair and recombination proteins [BR:
oli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FKG96_16505
Archaeal homologous recombinant proteins
FKG96_16505
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Ortholog
Paralog
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_23
AAA_21
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QEL02342
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All DBs
Position
complement(4005569..4008634)
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AA seq
1021 aa
AA seq
DB search
MIPISLTIKGLFSYQKEQTINFARLIEGQLFGIFGSVGSGKSSVLEAIAFALYGETERLS
TRDDRNYNMMNLKSDELLIDFVFSNFDEKQYRFIVKGKRHGKKFEKVNTFDRSAYKFENG
MWQPLEVTTATPLLGLSYENFRRTIIIPQGKFQEFLQLTDKARTEMLKDIFQLDKYDFFQ
QTASLERKNNEVIQRLKGRLSVFEGINETYVGLALQKLQSLAAEVSTMKAELQQRESDLK
EQEILKRLFEDLKTAENSYKQLHLKSSEYQQLKQQLSDYEYCERYFKVNIQRAEELATGI
EKRKESLKEYQYKLKNCETLLMEQQQELANITLKYQSLELLNQKRNDYRTALQILQLKED
IDHLSGRIIKGKEFVHKAQQEKIYREKIALALREKLKKKRNEKLDLNTLSQIKNWFTSRE
HLEKNKKTSQLALDDITGTLKQLESTIDDLLVGVTTPIQNHKESLDTRIKTIDFELDKLS
NEIAHARMQVKLGDFVAALQRGEACPLCGALEHPQVMVLEDVENQLQQLNAKSVHLKDER
NLVQGLIRQLEILDGKKATILKSRDELLFRAESDEQALQVHFQSFIWESTCGRDDARTID
RLLEEHKTAEKELERLELEINENDAILKKAEIDRDQYEIGIQKIVAEERVKVGALNMLTK
QLHNLSEDEVYQYDKNYLENSILDIDSESKAIVDQYEQLQALVQEEQQLKVSLEARFQAV
NENLAAEQERLDFITDQLRGSLSKSKYGSLNEVKNILNLAIAVEEVRSSVDLFFQQLYNA
KEQYTKLATEASDKVYNEELFLRSLSTYEVLRDRFNQEQEKYAAAKADYDRLLKQLEEKQ
QLEDDLARLQHRADNLTILKSLFKGSGFVSYISTVYLQQLCEAANKRFYKLTQQQLRLEV
TDKNEFQVRDYLNDGKTRLAKTLSGGQTFQASLSLALALAESVQQQNRSKQNFFFLDEGF
GSLDRESLAVAFDTLKTLRNENRIVGVISHVEELQQEIDVYLKVKNDPFTGTQISGSWEI
K
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgattccaatttcattaactataaagggacttttttcctatcaaaaggagcaaacgatt
aatttcgctcgactaattgagggacaattattcggcattttcggttccgtgggttcaggc
aaatcatcggttttggaggcgattgcttttgctttgtacggagaaaccgaacgactgagc
acccgggacgatagaaactataacatgatgaacttgaaatcggatgagttgctcattgat
tttgtgttcagcaacttcgacgaaaagcagtatcgatttatcgttaaagggaaacgccat
ggcaagaaatttgagaaagtaaatactttcgatcggtctgcttataagtttgaaaatggt
atgtggcaacctttggaggtaacaactgcgacacctttattgggacttagttacgagaac
tttagacgtaccattattattccacaaggcaaatttcaagagttcttacagctgacagat
aaagcccgaacggaaatgctcaaagatatttttcagctggacaaatatgatttttttcaa
cagaccgcctctttagagcgaaagaacaacgaagtgatccaacgtctaaaaggacgttta
tctgtttttgaaggaataaatgaaacctatgttggtctcgctttgcaaaaattgcaaagc
ttggcagcagaagtctcgacaatgaaggccgagcttcaacagagagaaagcgacctaaaa
gagcaggagatattgaaacgattatttgaggacttaaaaactgctgaaaactcctataag
cagttgcatcttaagtcatcggaatatcagcagttgaaacagcaattgagtgattatgaa
tactgcgaacgttattttaaggtaaatatacaacgagcggaagagctggcaacaggaata
gaaaagcgaaaagaaagcttgaaagaatatcagtataagctcaaaaactgcgaaacatta
ctgatggagcaacagcaagaacttgccaatatcacgttgaaatatcaatcacttgagctc
cttaatcaaaagcgtaacgattatcggactgctttgcaaatattgcagttaaaagaagat
atcgatcatttaagtggacgaattatcaaggggaaagaatttgtccataaagcgcagcag
gagaagatatatcgagaaaaaatagccttagcgcttcgagaaaaactaaaaaagaaacgg
aatgaaaagctggatttgaacaccttatcgcagataaaaaattggtttacttcccgcgag
catttagaaaaaaacaaaaaaacaagccaattagcacttgatgatataactggaacttta
aagcaacttgaaagtaccatcgacgacttacttgttggggtaactactccgatccaaaat
cataaagaatcattagacacacgcataaagaccattgattttgagctcgataagctttca
aatgaaattgcgcatgcccggatgcaagttaaattaggtgattttgtcgcggccttgcag
cgaggtgaagcttgtccgctttgtggagcattggagcaccctcaagttatggtcttagag
gatgtggaaaatcagctccaacaattaaatgctaaatctgtacatctcaaggacgaacgg
aatctcgtgcagggacttatacgccagcttgaaatattagatggaaaaaaagccaccatt
cttaagagtcgggacgaactcctttttagggccgagtcagacgaacaggcattacaagta
catttccaatcctttatttgggaatctacttgcggtagagacgatgcccgcactattgat
cggttacttgaagaacacaaaaccgcagaaaaagagttggaacgactggaactggagatt
aatgaaaatgatgccattttgaaaaaagcagaaatagatagagatcaatatgaaatcgga
atacaaaaaatagtagcagaagaacgagtaaaggttggggccttaaatatgctcacgaaa
caacttcacaacttatctgaagatgaagtttatcaatatgataaaaactatctggaaaac
agtattttagatatagatagtgaaagtaaagctattgtcgatcaatacgagcaacttcaa
gctttggtacaggaggagcaacagctaaaagtatcgttggaagcaagatttcaggcagtc
aatgaaaacttagctgccgagcaggaacgtctggactttattactgatcagttacgaggt
tctttaagtaaatcgaagtatggcagtttgaatgaagttaaaaatatattaaatctagca
attgctgtagaagaggtccgaagcagtgtagacctattcttccaacaattatataatgcg
aaagaacaatataccaagctagctacggaggctagcgataaagtttacaatgaggagctg
tttctaaggtcattaagcacttatgaagtgctcagggatcgattcaatcaagaacaagag
aaatatgctgctgccaaagcagattacgataggcttctaaagcaactcgaagaaaaacaa
caactagaagacgatttggcgcgtttacagcatcgagcagataacctgactattcttaaa
agcctatttaaaggaagtggctttgttagttatatatccacggtttacttacaacaatta
tgtgaggcagcgaacaagcgtttttataagcttacacagcagcaattgcgactggaggta
accgataaaaatgaatttcaggtaagagattacttaaatgatggtaaaaccagattagcc
aagaccttgtccggcggccagacttttcaggcttcattgtcgctagccttagctcttgcg
gaatctgtacaacaacaaaatcgatccaagcaaaattttttctttttagatgaaggcttt
ggttctttagatcgggaatcattggcagtggcgtttgatacgttgaaaacattacgaaac
gaaaatagaattgtgggggttatttctcacgtagaggagttacagcaggaaatagatgtt
tatctaaaggttaaaaatgatccttttacgggcactcaaataagtggaagttgggaaatt
aaataa
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