Olivibacter sp. LS-1: FKG96_25905
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Entry
FKG96_25905 CDS
T06195
Name
(GenBank) hypothetical protein
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
oli
Olivibacter sp. LS-1
Pathway
oli00040
Pentose and glucuronate interconversions
oli01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oli00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
FKG96_25905
Enzymes [BR:
oli01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
FKG96_25905
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
DUF5680
PD40
Motif
Other DBs
NCBI-ProteinID:
QEL04116
UniProt:
A0A5C0ZQ98
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Position
complement(6211003..6212277)
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AA seq
424 aa
AA seq
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MKKHLLFFFALLQVAILPAQPLLETGGKEMPDEWVDNVTHHRVMRLVRRQGINLSFYFHN
NPFVGNEMVFYGSNERQKESYTGELKNKAQEIYNLNVKDKQLYVVNLENLKVRRLTQESG
KIQGEIVHAKSGKVYYQCQDSVFSVAVKTGKKELIFVFPADFKASITTINADASLLGGAY
ATEEEKEISKRYPEKSQYFNRIYEARLPRTLFTIDIKTRQLQKIFTDSAWLNHVQFSPTD
PNLLMFCHEGPWHKVDRIWTINVKTKATPKLIHKRSMDMEIAGHEWFSKNGNYIWYDLQL
PRGQTFFVSGTDLKTGKEIKYQLQRNEWSVHYTSAVDDKTFAGDGGDPGSVAKAPDGQYI
YLFKPQGDHFEAERLVNMKHHNYKLEPNVHYSPDGKWIIFRANFEGFEGIYAVEIEKRRT
NDSQ
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagcatttattgtttttctttgctctgctgcaggtagcgatcctacctgcgcaa
ccattattggaaaccggcggaaaggaaatgccggatgaatgggtcgacaacgtaacacat
catcgggtgatgcgtttggtgcggaggcagggaatcaatttgagcttctattttcataac
aatccttttgtaggaaatgagatggttttttacggaagtaatgagcgacagaaagaaagt
tataccggagagctaaagaataaggcacaagaaatttataaccttaatgtgaaagacaag
cagctttatgtagttaatttagaaaacttgaaagttcgccggttaacgcaagaatccgga
aaaatccaaggggaaatcgtgcatgcaaaaagcgggaaagtatattatcaatgtcaggat
agcgtattcagcgtagcggtaaaaacaggtaaaaaggaactgatctttgtatttccggca
gatttcaaggcctcgattacaacgatcaatgctgatgcttccctactaggcggagcctat
gccacggaggaagagaaagaaatttcaaaacgctatccggaaaagagccagtatttcaat
cgcatttatgaagcaagattaccgagaacattatttaccatcgatatcaaaacaagacaa
ctgcaaaagatatttacggatagcgcctggttaaatcatgtacaattttctcctacagat
cccaacttattaatgttctgtcacgaaggcccttggcataaggtcgatcggatctggacc
attaacgtaaaaacaaaagctacgcccaaactcattcataaacgtagcatggatatggaa
attgcgggccatgaatggttcagtaagaacggcaactacatatggtacgatctgcaattg
cctcgcggtcaaacattttttgtaagtggtacggatcttaaaaccggaaaggagataaaa
taccaattgcaacgaaacgaatggtctgttcactacacctccgcagttgatgataaaacc
tttgctggcgatggcggcgatccagggtcggtagctaaagcaccggacggacaatatatt
tatctttttaaacctcaaggtgatcattttgaggcggagcgcttggtcaatatgaaacat
cataattataagttggaaccgaatgtgcattattcaccagatgggaaatggattatattt
cgggcaaattttgagggctttgaaggtatatatgcagttgagatagaaaagcgaagaact
aatgacagtcaatag
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