Olivibacter sp. LS-1: FKG96_26240
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Entry
FKG96_26240 CDS
T06195
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
oli
Olivibacter sp. LS-1
Brite
KEGG Orthology (KO) [BR:
oli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oli03016
]
FKG96_26240 (truB)
Enzymes [BR:
oli01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FKG96_26240 (truB)
Transfer RNA biogenesis [BR:
oli03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FKG96_26240 (truB)
Prokaryotic type
FKG96_26240 (truB)
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Paralog
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QEL04181
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Position
6317699..6318448
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AA seq
249 aa
AA seq
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MEDEKEKPIFPRFDFTAGEVLLIDKPYKWTSFDVVGKIRNALKPLKLKVGHAGTLDPLAT
GLLIVCTGKRTKTIDELQAQEKEYIGTFTLGATTPSYDLETIPDSFFDITNLTEQDLLRA
SLTFVGAIEQYPPVHSAVKMQGERLYEKARRGESVELKPRRVTIYEFELTRIALPEVNFR
VVCSKGTYIRSLAHDFGKAVGAGAYLSELRRTRSGNFHVRDAWNVLELSDHIRSLKEQGL
LINDEGEHS
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgaaaaagaaaagccgattttccctcgtttcgatttcaccgccggtgaggtt
ttactgatcgataagccttacaaatggaccagttttgacgtagtgggaaagatccgtaat
gctttaaagcctttgaaattgaaagtaggccatgcaggcacactcgatccgctggctaca
ggtttacttattgtttgtaccggcaaacgcactaaaactattgatgagcttcaagcgcag
gaaaaagaatacataggaaccttcacactcggggcaacaacaccgtcttatgacttagaa
acaattccggatagcttttttgatatcacaaatcttacggaacaagatctacttcgcgcc
tcactaacattcgtcggtgctattgaacaatatccgccggtacattcggctgtaaaaatg
caaggcgaaagattatacgaaaaagccagacgaggcgagtccgttgaactaaaacctcgt
cgtgtaacgatctatgagttcgaattaacccgcattgctcttccggaagttaacttcaga
gtcgtttgcagcaaaggaacttacattcgatcgttggcacatgactttggaaaagcagtg
ggcgccggtgcctatctgagtgaattgagaagaactcgcagcggtaattttcatgtcaga
gatgcctggaatgttttggagctgtccgatcatattcggtctttgaaagaacaaggtcta
ttaataaatgacgaaggagaacattcataa
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