Olleya sp. Bg11-27: CW732_02525
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Entry
CW732_02525 CDS
T05214
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
oll
Olleya sp. Bg11-27
Brite
KEGG Orthology (KO) [BR:
oll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oll03016
]
CW732_02525
Enzymes [BR:
oll01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
CW732_02525
Transfer RNA biogenesis [BR:
oll03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
CW732_02525
Prokaryotic type
tRNA splicing ligases
CW732_02525
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
ABC_toxin_N
DCD_N
Motif
Other DBs
NCBI-ProteinID:
AUC74614
LinkDB
All DBs
Position
590341..591732
Genome browser
AA seq
463 aa
AA seq
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MGKKLSGKDLIKLGFPKNNSINVTLGQINRYQKRVKKERILEDAKKVLLHPENYKGDGIW
GKIAESLLDPVNVTKQKLNTHRVPFQIYGEHEIDDQAKYQLYDALKLPIAVAGALMPDAH
VGYGLPIGGVLATKNAVIPYGVGVDIGCRMCLTIYPVKASYLKGKKHQLETILSEHTKFG
MYETHKTKHDDPIFERDEFKIIPLVKRLKDKAFKQLGTSGGGNHFVEFGEVSITDINNEW
DLPLGEYLGVLSHSGSRGLGANIAKHYTYLATKQCPLPKHVQHLAWLDLNTHDGQEYWLA
MNLAGDYAQACHDNIHKRIAKLLGERPLAKIANHHNFAWKENVNGEDCIVHRKGATPAKK
GALGIIPGSMTAPGFIVRGLGNKDSLQSASHGAGRLLSRRQCKMTLTQSAVKKELQKHDV
SLIGGGIDEAPMAYKNIESVMQNQLELVEVVGKFTPKIVRMAR
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaattaagcggaaaagacttaatcaaattaggctttccaaaaaacaacagt
attaatgtgactttaggtcaaattaatcgctatcaaaaacgcgttaaaaaagaacggata
ttagaagacgcaaaaaaagtattattacatccagaaaattataaaggcgatggcatttgg
ggaaaaatagcagaaagcctgctagacccagtaaacgtaacaaagcaaaagttaaacaca
catcgtgtgccatttcaaatttatggagagcatgagattgacgaccaagcaaaataccaa
ttgtacgacgctttaaaactacctattgcagttgcaggtgctttaatgcccgatgcccac
gtaggttatggcttaccaattggtggtgttttagcaacaaaaaatgcagtaattccttat
ggagtaggcgtagatattggatgcagaatgtgtttaactatttatccagtaaaagcttct
tatttaaaaggtaaaaaacatcaattggagactattttgtctgaacacacaaagtttgga
atgtatgaaacacataaaactaagcatgatgatcctatttttgagcgtgacgaatttaaa
atcattccgttagtaaaacgcttaaaagacaaagcctttaagcaattaggaacctctggt
ggagggaatcattttgtagaatttggagaggtaagcattacagatattaataacgaatgg
gatttaccattaggagaatacctaggtgttttatcgcatagtggctcacgtggtttaggc
gcgaacatcgctaaacactatacatatttagcaacaaagcaatgtccgttaccaaaacac
gtacaacatttagcatggctagatttaaatacacacgacggacaagaatactggttagct
atgaatttagctggagattatgcacaagcatgccatgacaacattcataagcgaatagcc
aaattattgggagaaagaccgcttgctaaaatagccaatcatcacaattttgcttggaaa
gaaaatgtgaacggagaagactgtatagtccacagaaaaggagcaacaccagctaaaaag
ggagcgctaggtattattccaggatctatgacggcaccagggtttatagtacgcggccta
ggaaataaagacagcttacaatcggcatcgcacggtgcgggcagactattatctagacga
caatgtaaaatgacattaacacaaagtgccgtaaaaaaagaattacaaaaacacgacgtc
tctttaattggcggtggtattgacgaagctccaatggcttataaaaacattgaaagcgtc
atgcaaaaccaattagaactagtggaagtcgttggcaagtttacgcctaaaattgtaaga
atggcaaggtaa
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