Olsenella sp. oral taxon 807: ADJ70_06260
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Entry
ADJ70_06260 CDS
T04016
Name
(GenBank) RtcB protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
olo
Olsenella sp. oral taxon 807
Brite
KEGG Orthology (KO) [BR:
olo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
olo03016
]
ADJ70_06260
Enzymes [BR:
olo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
ADJ70_06260
Transfer RNA biogenesis [BR:
olo03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
ADJ70_06260
Prokaryotic type
tRNA splicing ligases
ADJ70_06260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Hexapep
Motif
Other DBs
NCBI-ProteinID:
AKT48638
LinkDB
All DBs
Position
complement(3018360..3019559)
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AA seq
399 aa
AA seq
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MFEIEGRYATAKCFATVVEDEAIEQVRTMCDTKFTEGCQVRIMPDVHVGAGCTIGTTMTV
KDKVVPNVVGVDIGCGMYTVNLGKGDIDMKAFDEACHKVPSGKHVWEGRKERFNLLELEC
YRMLRDAKRIGRSIGTLGGGNHFIEIDASADGTHYLVIHSGSRNLGKQVAEYYQSLAVDL
HKGKEEYFAKRDALIAEYKAAGRRKEIQSALKELHWTERQPDVEADLCWLYGTYFDSYMH
DIEICQAFARRNREVMANEILSLTGLEGSQAFHTIHNYIDTSEMILRKGAIAAHEGELVL
IPINMRDGSILARGRGNPDWNFSAPHGAGRVLSRTRAREQLNMDEYRHSMEGVYTTSVSE
STIDEAPMAYKSLKDIIGPVNESVDVIEVLKPIYNFKAA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagatagagggacgctacgcaacagcgaagtgcttcgccacagtcgtggaggac
gaggccatcgagcaggtgcgcaccatgtgcgacaccaagttcacggaaggttgccaggta
cgcatcatgcccgacgtacacgtaggtgccggctgcaccataggaaccaccatgaccgtg
aaggacaaggtggtccccaatgtcgtgggcgtcgacatcggctgcggcatgtacacggtc
aaccttggcaagggcgacatcgacatgaaggcgttcgatgaggcctgccacaaggtgccc
tccggcaagcacgtatgggagggccgcaaggagcgcttcaacctcctggagcttgagtgc
taccggatgctcagggacgcgaagcgcatcgggaggtccattggcacgctcggcggcggc
aaccacttcatcgagatagatgcctctgccgacgggacacactacctggtcattcactct
ggcagtcgcaacctgggcaagcaggtggccgagtactaccagagtctcgcggtggacctg
cacaagggaaaggaggagtacttcgccaagcgcgacgcgctcatcgccgagtacaaggcg
gcggggcgccgcaaggagatccagtccgcactcaaggagctgcactggacggagaggcag
cccgacgtggaggccgacctctgctggctctatgggacatactttgactcctacatgcat
gacatcgagatctgccaggcctttgcacgacgcaaccgagaggtcatggccaacgagatc
ctcagcctgaccggcttggagggaagtcaggccttccacaccatccacaactatatagac
acgagcgagatgatactgcgcaagggagccattgccgcacacgagggcgagctcgtgctc
atccccatcaacatgcgcgatgggtccatcctggcccgcggcaggggaaaccccgactgg
aacttctcggccccacacggcgccggtcgtgtcctgtcccgcacccgagcccgcgagcag
ctgaacatggacgagtatcgccacagcatggagggcgtctacaccacgagcgtcagcgag
tccacgatcgacgaggcacccatggcctacaagtcgctcaaggacatcatcggccccgtg
aacgagtccgtagacgtcatcgaggtgctcaagcccatctacaacttcaaggcagcgtaa
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