Olsenella uli: Olsu_0772
Help
Entry
Olsu_0772 CDS
T01285
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ols
Olsenella uli
Pathway
ols03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ols00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Olsu_0772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ols03019
]
Olsu_0772
Enzymes [BR:
ols01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Olsu_0772
Messenger RNA biogenesis [BR:
ols03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Olsu_0772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HEM4
AAA_22
Rossmann-like
Motif
Other DBs
NCBI-ProteinID:
ADK67885
UniProt:
E1QZS1
LinkDB
All DBs
Position
complement(873161..874693)
Genome browser
AA seq
510 aa
AA seq
DB search
MHGKATPRKRPMANHQRGPRGRKHDMPAQATDETESADETEFDDFASLGLGALTLAAVRD
MGYEVPTPVQARSIPPALRGRDVIAAAQTGTGKTAAFLLPSLDGLPHAQAGQGPLMLVVT
PTRELAQQIDEVARAICARTGHTAATVVGGVGYEPQRRALRRGCDLLVATPGRLIDLMDQ
GDAHLGEVQVLVLDEADRMLDMGFLPAMRKIVGRTPEGRQTLLFSATLDGHVTSNTESLV
KDPVRVEIAHKGTAAETIEQFVLGVSPEAKHAALTHVLENEGAERVIVFCRGKHRADGIC
RRLRRKGFSAAPIHGNRSQNQRERALRGFREGSVGVLVATDVLARGIDIPDVAYVVNFDV
PGDAEDYIHRIGRTGRAGESGWALTFVTEDDYLDLRDVEKLMGRVVPTYPRAHGIDLGEH
PQLIDPMRDPREKLPGKRARRRMAERRTARRAPDVDGMGGSEGIAHGGKDAKTSPIRRAS
GSYGAPNKPRKPAGRSGRRHPGDRGGTRRR
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgcacggcaaagccactccaagaaagagacctatggcaaaccaccagcgcggtcctcgc
ggccgcaagcacgacatgccggcgcaggcgaccgacgagaccgaatcggccgacgagacc
gaattcgatgacttcgcatcccttggcctgggcgccctcacgcttgcggccgtgagggac
atgggctacgaggtgccgacgcccgtgcaggcacgctccatccccccggcgctccgaggc
agggacgtcatcgccgccgcccagaccggcacggggaagacagccgcgttcctcctcccc
tcacttgacgggctgccccacgcccaggccgggcaagggccgctcatgctcgtcgtgacg
cccacgcgagagcttgcccagcagatcgacgaggtggcacgggccatctgcgcgcgcacc
ggacacacggcggcgactgtcgtgggcggtgtgggctacgagccgcagcgcagggccctg
cgtcggggctgcgacctgctcgtagcgacgcccggtcgcctgatcgacctcatggaccag
ggggatgcccacctcggggaggtccaggtgctggtgctcgacgaggcggaccgcatgctt
gacatgggcttccttcctgccatgcgcaagatcgtgggaaggacgcctgaggggcgccag
acgctgctcttctcggcaacgctcgacggacacgtgacatccaacaccgagtcgctggtc
aaggaccccgtacgcgtcgagatagcccacaagggcaccgcagccgagacgatcgagcag
ttcgtcttgggagtctcgcccgaggcgaagcacgcggcgctcacccatgtgctcgagaac
gagggggccgagcgcgtcatcgtcttctgtcgcgggaagcaccgcgcggacggaatctgt
cgaaggctcaggagaaagggcttctccgccgcccccattcacgggaaccgcagtcagaac
cagcgcgagcgcgccctcaggggctttcgcgagggatcggtcggcgtcctggtggcaacc
gacgtgctggcacggggcatcgacatccccgacgtcgcctacgtcgtcaacttcgacgtg
cctggcgacgccgaggactacatccaccgcatcgggcgcaccggacgtgcgggcgagagc
ggctgggcgcttaccttcgtgacggaggatgactacctcgacctgcgcgacgtcgagaag
ctcatgggacgcgtggtgccgacgtatccccgagcgcacggcatcgacttgggagagcat
ccgcagctgatagaccccatgcgcgacccccgggagaagctgccgggaaagagggcgcgc
aggaggatggccgagcggcgcacggcacgacgcgctcctgatgtcgacgggatggggggc
tccgaaggcatcgcgcacggcggcaaggatgccaagacgagccccattcgcagagcgagc
ggcagctatggcgcacccaacaagcccaggaagccggcaggccgctccggacgacgtcat
cccggcgatcgaggcggcacgaggcggcgctga
DBGET
integrated database retrieval system
