KEGG   Olsenella uli: Olsu_1304
Entry
Olsu_1304         CDS       T01285                                 
Name
(GenBank) Excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
ols  Olsenella uli
Pathway
ols03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ols00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Olsu_1304
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ols03400]
    Olsu_1304
DNA repair and recombination proteins [BR:ols03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Olsu_1304
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Olsu_1304
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N nSTAND1 AAA_16 AAA_29 RsgA_GTPase AAA_23 Zn_ribbon_8 AAA_21 AAA_25 DnaJ_CXXCXGXG AAA_15 nSTAND3 cobW Viral_helicase1 YmcF-like BCA_ABC_TP_C
Other DBs
NCBI-ProteinID: ADK68410
UniProt: E1QWA7
LinkDB
Position
complement(1483896..1486796)
AA seq 966 aa
MASESIVIRGAREHNLRDIDVTIPRDKLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
SYARMFLGQMDKPDLDSIDGLSPAVSIDQKTTSRNPRSTVGTVTEIYDYLRLLFARIGVP
HCPECGRPIARQTTDQVADKVLAAGQGRRAYVLAPVVLGRKGEYAKLFEDLKKEGFSRVR
VDGEVRELEGEIKLDKKYKHTIEVVVDRIVIRENSLGRIAEAVEQATKLASGRVSFYLLP
GRSEGEGGKGELLRYSLALACPEHGHSIDDLQPRDFSFNAPYGACPDCDGLGVRRVVDAE
ALIEDPNLSVAGGVFGPIFGRSNYYPQIFSAVCRHLGESDETSWNKLKKRTRAALLDGLG
ETKVRVDYHTRDGRDTHWFTKFSGIRSILFEKYQETTSETMRAHFEKFIREVPCPSCHGA
RLKPEYLAVTVGERNIQEVCDLSCKDALAFFEGLTLTERQHLIGAPIVKEVIARLRFMVN
VGLDYLTLSRAAATLSGGEAQRIRLATQIGAGLMGVLYILDEPSIGLHQRDNDRLIETLR
RLRDQGNTVIVVEHDEDTIRAADYVIDMGPGAGELGGDIVAAGTPADIMANPDSLTGAYL
TGRRAISLPESRRNPRRGALRITGACANNLKGVSAKVEYGTLTVVTGVSGSGKSSLVTNT
LAPALTNEVQRSKRLVGPYRKLEGIVDGDGTRLIDKVIDIDQSPIGRTPRSNPATYIGLW
DDLRNLFASTPESRARGYNPGRFSFNVSGGRCEACKGDGQIKIEMNFLPDIYVPCEVCGG
KRYNRETLEVTYHGKTISDVLDMTVTEALAFFSSIPRVKNKLQTLYDVGLGYIHLGQSAT
TLSGGEAQRVKLAKELHRQQTGKTFYILDEPTTGLHFEDVRMLVEVLEKLVDAGNTVLVI
EHNLDVIKMADRVIDLGPEGGEGGGTIVAYGTPEKVAGVEGSYTGRYLARVLARDHERAR
MAEAGR
NT seq 2901 nt   +upstreamnt  +downstreamnt
atggcatcagaatccattgtcattcgcggcgcgcgcgagcacaacctgcgcgacattgat
gtcactattccgcgtgacaagctagtcgtgatcacgggcctctcgggctccggcaagtcc
agtctcgccttcgacaccatctacgccgaggggcagcgccgctatgtggagtctctctcc
agctacgcccgcatgttcctgggccagatggacaagcccgacctcgactccatcgacggc
ctctccccggccgtctccatcgaccagaagaccacgtcgagaaacccgcgctccacggtg
ggtaccgtcacggagatctacgactacctgcgcctgctcttcgcccgcatcggggtgccg
cactgccctgagtgcgggcggcccatcgcgcgccagaccaccgaccaggtggccgacaag
gtcctcgcagcggggcaggggcggcgcgcctacgtgctcgcccccgtcgtgctcggtcgc
aagggcgagtacgccaagctcttcgaggacctcaagaaggagggcttcagccgcgtgcgt
gtggatggggaggtccgcgagctcgagggtgagatcaagctcgataagaagtacaagcac
accatcgaggttgtcgtcgaccgcatcgtgatccgcgagaactcgctcggccgcatagcc
gaggccgtggagcaggcgacgaagctcgccagcggtcgcgtgagcttctacctgctgccc
ggtcgcagcgagggggaggggggcaagggcgagctcctgcggtactcgctcgcgctggcc
tgtcccgagcacggccactccatcgacgacctgcagccgcgcgacttctccttcaacgcc
ccctatggcgcctgccccgactgcgacggcctgggcgtgcgccgcgtcgtggatgccgag
gccctgatcgaggaccccaacctctccgtcgcagggggcgtcttcgggcccatattcggg
cgctcgaactactacccgcagatcttctccgcggtctgcaggcacctgggcgagtccgac
gagacttcctggaacaagctcaagaagaggacgcgggcggcgctgctcgatggcctgggc
gagacgaaggtccgcgtggactaccacacccgcgacggccgtgacacccactggttcacc
aagttctccggcatccgctcgatcctgttcgagaagtaccaggagaccacgtccgagacc
atgcgcgcccacttcgagaagttcatccgcgaggtcccgtgccccagctgccatggcgcg
cgcctgaagccggagtaccttgcggtcacggtgggggagaggaacatccaggaggtctgc
gacctttcctgcaaggacgccctcgcgttcttcgagggcctcaccctcaccgagcgccag
cacctcatcggcgcccccatcgtcaaggaggtcatcgcccgcctgcgcttcatggtgaac
gtcggcctggactacctcacgctcagccgcgccgctgccacgctctccggtggcgaggcc
cagcgcatccgcctggccacccagatcggcgcggggctcatgggcgtcctctacatcctg
gacgagccctccataggcctgcaccagcgtgacaacgaccgcctgatcgagaccctcagg
cgcctgcgcgaccagggcaacaccgtcatcgtggtcgagcacgacgaggacaccatccgt
gcggccgactacgtgatcgacatggggcccggtgccggagagctgggcggcgacatcgtg
gctgccggcacgccggcggacatcatggccaacccggactcgctgaccggcgcctacctc
acgggccgcagggccatctccctgcccgagagtcgtcgcaacccccggcgtggggccctc
aggatcacgggggcctgcgccaacaacctcaagggcgtctccgccaaggtcgagtacggc
accctcacggtcgtgacgggggtgtcgggatcgggcaagtcgtcgctggtgaccaacacg
ctcgcccccgcgctcaccaacgaggtccagcgctccaagcgcctggtggggccctacagg
aagctcgagggcatcgtggacggcgatggcaccaggctcatcgacaaggtcatcgacatc
gaccagagccccatcggccgcacgccgcgctccaatcccgccacctacatcggcctctgg
gatgacctgcgcaacctcttcgcctccacgccggagtcgcgcgcacgcggctacaacccg
gggcgcttctcgttcaacgtctccggcgggcgctgcgaggcctgcaagggcgacggtcag
atcaagatagagatgaacttcctgccggacatctacgtcccctgcgaggtgtgcgggggc
aagcgctacaaccgcgagacgctcgaggtcacctatcatggaaagaccatctctgacgtg
ctggacatgaccgtgaccgaggcgctcgcgttcttctcgagcataccccgcgtcaagaac
aagctacagaccctctatgacgtgggcttgggctacatccatctggggcagagcgccacc
acgctctcgggcggcgaggcccagcgcgtgaagctcgccaaggagctgcaccgccagcag
acgggcaagaccttctacatcctggacgagcccacgacgggactgcacttcgaggacgtc
cgcatgctggtcgaggtgctcgagaagctcgtcgacgccggcaacaccgtgctcgtgatc
gagcataacctcgacgtcatcaagatggcggaccgcgtcatcgatctgggacccgagggc
ggcgagggcggcggcaccatcgtcgcctacgggacgccggagaaggtcgccggggtcgag
gggtcctacacgggcaggtacctggcgcgcgttctggcccgcgaccacgagcgcgcccgc
atggcggaggcgggacgctag

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