Ostreococcus lucimarinus: OSTLU_10510
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Entry
OSTLU_10510 CDS
T01029
Name
(RefSeq) predicted protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
OSTLU_10510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
olu03021
]
OSTLU_10510
03019 Messenger RNA biogenesis [BR:
olu03019
]
OSTLU_10510
Transcription machinery [BR:
olu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
OSTLU_10510
Messenger RNA biogenesis [BR:
olu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
OSTLU_10510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
Nab2-like_zf-CCCH_
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
5001676
NCBI-ProteinID:
XP_001417675
JGI:
10510
UniProt:
A4RX17
LinkDB
All DBs
Position
5:<106339..>106584
Genome browser
AA seq
82 aa
AA seq
DB search
RKNYRQTVCRHWLRNLCMKGNACGFLHQFDKSRMPTCRFFAKYGECKEPDCPYKHSLEDM
KDCNMYKLGFCIHGSLCRFRHV
NT seq
246 nt
NT seq
+upstream
nt +downstream
nt
cgtaaaaactaccgtcaaaccgtgtgcaggcactggctgcgaaacttgtgcatgaagggc
aacgcgtgcgggttcctgcaccagttcgacaagtcccgcatgcccacgtgtcggtttttc
gcaaagtacggcgagtgcaaggaaccggattgtccgtacaagcactcgttggaggacatg
aaggattgcaacatgtacaagctcgggttctgcattcacgggtcgctgtgcaggtttaga
cacgtg
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