KEGG   Ostreococcus lucimarinus: OSTLU_119518
Entry
OSTLU_119518      CDS       T01029                                 
Symbol
hda
Name
(RefSeq) histone deacetylase, probable
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
olu  Ostreococcus lucimarinus
Pathway
olu03082  ATP-dependent chromatin remodeling
olu03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:olu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    OSTLU_119518 (hda)
   03083 Polycomb repressive complex
    OSTLU_119518 (hda)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:olu03036]
    OSTLU_119518 (hda)
Enzymes [BR:olu01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     OSTLU_119518 (hda)
Chromosome and associated proteins [BR:olu03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     OSTLU_119518 (hda)
   HDAC complexes
    Sin3A-HDAC complex
     OSTLU_119518 (hda)
    BRAF-HDAC complex
     OSTLU_119518 (hda)
    REST complex
     OSTLU_119518 (hda)
    SHIP complex
     OSTLU_119518 (hda)
    MiDAC complex
     OSTLU_119518 (hda)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     OSTLU_119518 (hda)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    OSTLU_119518 (hda)
  Chromatin remodeling factors
   NuRD complex
    OSTLU_119518 (hda)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 5000433
NCBI-ProteinID: XP_001416403
JGI: 119518
UniProt: A4RT00
LinkDB
Position
2:complement(473456..474730)
AA seq 424 aa
MVAKERVCYYYDEEVGRNYYGPNHPMKPHRLCMTHNLILAYDLHKHLQVFRPRACTNTEF
TQFHSEDYVDFLSKITPDKQQQYVLEMQRFNLGEDCPIFDHMLDFCRRYTGGSIDGVRRL
NQGVSDIAINWSGGLHHAKKAEASGFCYINDLVLAILELLKQHARVVYIDIDIHHGDGVE
EAFYMTDRVMTVSFHKYGDMFFPGTGGLRDIGINSGKYYSVNVPLNDGIDDKSFVDLFKF
VMQDVMDSFQPGAIVLQCGADSLAGDRIGCFNLSLKGHAECVSFMKSFAKPILVTGGGGY
TKSNVARCWANETATLLGKQLVEHIPPHENYYEYYADAGYKLKAHAPVWIENLNTPSYLN
QVKEKVRQNLKSLTFAPSVEFSEAPPAVLVPELDESDLNPDERYGGSLGQDSVVISKEEF
YEND
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggtcgccaaggaaagggtgtgctactactatgacgaagaagttggtagaaactactac
gggccgaaccaccccatgaagcctcatcgcttgtgcatgacgcacaatttgattttggcc
tatgatttgcataaacacctgcaagttttcaggccacgagcctgcacgaacacagaattc
actcagtttcatagcgaagattacgtcgatttcttgtcaaaaataactcctgacaagcag
caacaatacgttttagaaatgcaaagattcaaccttggcgaagactgccccattttcgat
cacatgcttgacttttgtcgacggtacacaggtgggtccattgacggagtccggcgattg
aatcagggggtatcagacattgccataaactggtctggaggtttacaccatgcaaagaag
gcagaagcttcgggattttgctacatcaacgacctcgtgttagcgatactagaactcctg
aagcaacatgcacgggtcgtgtacatagatatagatattcatcacggtgacggagtggaa
gaagcattttacatgactgatcgagtgatgaccgtcagttttcataaatatggcgatatg
ttcttcccgggcacaggtggtttgagggacatcggcataaactcgggaaaatactacagt
gtcaatgtgcccttgaatgatggcatagatgacaaaagctttgtggatctattcaaattt
gtcatgcaagacgtgatggattcattccaaccaggcgccatcgtcctccaatgcggcgct
gattcactagctggcgatcgaatcggttgctttaacctttcactgaaaggtcacgcagaa
tgtgtttccttcatgaaaagttttgcgaagccgatacttgttacaggtggcggaggctat
acgaaatccaatgtagccagatgctgggcgaatgagacagcaactctcctaggtaaacaa
ctggtagaacatattccaccgcacgagaactattacgagtattacgccgatgcaggatac
aagttgaaggcacacgcgccggtgtggatagaaaatttgaacacaccttcatacttgaat
caggtgaaagaaaaagttcggcaaaacttgaaatccctcacgttcgcaccgagtgttgaa
ttcagcgaagcacctcccgccgtcctcgtaccggagttggacgagagtgatctgaaccca
gacgaaagatatggcgggagtttgggtcaagacagcgtcgtcataagtaaggaagagttc
tacgaaaacgactaa

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