Ostreococcus lucimarinus: OSTLU_119553
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Entry
OSTLU_119553 CDS
T01029
Symbol
swr1
Name
(RefSeq) Swr1-Pie_related helicase
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
OSTLU_119553 (swr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
olu03036
]
OSTLU_119553 (swr1)
Chromosome and associated proteins [BR:
olu03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
OSTLU_119553 (swr1)
SWR1 complex
OSTLU_119553 (swr1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HSA
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
5000432
NCBI-ProteinID:
XP_001416174
JGI:
119553
UniProt:
A4RSW5
LinkDB
All DBs
Position
2:join(539221..539292,539348..539778,539834..539993,540042..540108,540157..542588)
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AA seq
1053 aa
AA seq
DB search
MSPGDEEFVPLGEVEDDLVTFDEEAAMVTQDEQKAELLELKAEGELPLDQLLLRYGIQHA
IDKGGNTKQESRETGAARQPTVSLRSLKVEPQAVADNTVAYNEAVSIAAEITSEENIIRS
FEKLLHKTESTKPLPHFPEPTKTKSHWLHTLEEMSWLSGDFSRERKWRKRSALKVATTLS
KIRKREVQTDMKKAHEELVLARKTAKAIAGSILTFWNKANKVLSLQRQAADAQAQKMKLD
AQLDELVKVTEAYSARLAAKLNTNQPFPCYGGNVRTEQKHNIEPSIGSGSNLSVQTRSNC
SSTDILDFSLLKHSLRDYQLEGVRWLRNCYINNLNVLLADEMGLGKTIQTIALLSMLATE
FGNWGPHLIVVPTSVMLNWEVEFKKWCPALKVFTYFGSVRERRLKRHGWSKPNSFHVCIT
SYRIVTQDQSIFRRKNWEYLILDEAHMIKNWRSQRWQVLLNFSTKRRLLITGTPLQNELM
ELWALMHFLMPDLFGSHSEFKDWFANPMSAMVDGTQSVNELIVTRLHSILRPFILRRLKM
DVEKTLPEKHEHIVKCVLSRRQRRLYEEYISSNNTLRTLASGNVMGVMNCLMQLRKVCNH
PDLFAGRQICSPFDVKHVCWLSYFVLLTSARLKSARCGINLRLSGPNVAGNGKELNRYRS
RDRIEEQHNVGTSFMENIVLPLSEVRAERTTFQATSLSFYAAQALLSNITAHTRYATTIF
PKTKHLSQFGRIGQLAWFEDSAVIDNLIRFTFIIPNVRSTTPSVWSLNESTHSSGGRFEE
CALGLMAPIRKFVARQSMFVPDKRLVQFDCGKLQILATLLRKLKQDGHKALIFTQMTKML
DVLEAFLNLHGYTYCRLDGSTGAEQRQLLMQRFNSDKRLFVFILSTRSGGFGINLTGADT
VIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISEGTIEESILQKAVQKRELDNMAIQ
LGNFNTTSFSTQQAHSQQHAVSGETLENEAMFEQKRFERIHDVAALGESAAAHTTENTVD
EHYKSQLQSEDTFDLQALLPVEKYALLKCAAQS
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgggcgacgaggagttcgtgccgctgggtgaagtcgaggatgacttggtcact
ttcgacgaggaggcggcaatggtgactcaagatgagcagaaagcagagctattggaatta
aaagcggagggagaacttccactagatcagctacttcttcgatacggaattcagcacgcg
attgataaagggggcaacacgaagcaagagtcgagggaaacaggggcagctcgacaacca
acagtttccttgcgctccttaaaagtggagccccaggcagtagctgacaatactgttgcg
tacaacgaagcggtatccatcgcagctgaaatcaccagtgaagagaacataatacgtagc
ttcgaaaagttgttgcacaagacggaatcgacaaaaccactcccacattttccagagcca
acgaaaacgaaaagtcactggcttcacacgttggaggaaatgtcttggctttcaggcgac
ttttcgcgagagcgaaaatggaggaaacgttcggctttgaaggtggcaacaacactttca
aaaattcgtaaacgagaagttcaaaccgacatgaaaaaggcacacgaagaattagtacta
gcccgtaagacggcaaaagcaatcgcagggtctattctcacattttggaacaaggctaac
aaggtattgtcgttgcaacgccaagcagccgacgcacaagcgcagaagatgaagctcgac
gcacagttagatgagctcgtcaaggtcacagaagcctactcagcgcgactcgccgcaaag
ttgaatacaaatcagccttttccttgctacggtggaaacgtacgcacagagcaaaaacat
aacattgaaccttctattggcagtggatcaaacctttctgttcagactaggagtaactgt
tcttctactgatatactagacttttcattgctcaaacatagtttacgtgactatcagctg
gagggtgtcaggtggttaagaaattgctatatcaataatttgaacgtactattggcagat
gaaatgggcttgggtaaaactattcagactatcgctcttctttctatgctcgcgaccgag
tttggaaactggggaccacacttgattgttgtacccacatctgttatgctcaactgggag
gttgaatttaagaagtggtgcccagctttgaaagtgttcacctattttggttctgttcgc
gagaggcgtttgaagcggcatgggtggagtaagccgaatagtttccacgtttgcataact
tcttatcgcattgttactcaggatcagagtatctttcgacgtaaaaattgggagtatcta
atactggatgaggcccacatgataaagaattggcgatcacagcgttggcaagtactctta
aattttagtacgaagcgtaggctcttgatcactggcactccactgcagaatgaattgatg
gaactgtgggcgctgatgcactttctgatgccagacttatttggatctcactctgaattc
aaagactggtttgcgaatccaatgagtgctatggtggacggcactcagtcggtaaatgag
ttgatagttacccgtctacattctatcctccgaccatttattttgcgtaggttgaaaatg
gacgtcgaaaagacgcttccagagaaacacgaacacatcgtgaaatgcgtcctatcccgc
cggcaaaggcgcctgtacgaggagtacatatcctctaacaacacactcaggacactagca
agcgggaacgtcatgggtgtgatgaactgtctcatgcagcttagaaaggtttgcaatcac
ccagacttgttcgccggaaggcagatatgtagtccatttgatgtgaaacatgtatgttgg
ctatcatatttcgtgttgctcacgagtgcgcgcctcaaatcggcaagatgcgggattaat
cttcgactcagtggaccaaatgtggccggcaatggaaaagaattgaaccgctatagatcg
cgagatcgaattgaagaacagcataatgtcggcacttctttcatggaaaatatcgtgctt
ccattatcagaagtacgagccgaacgcacaacatttcaagcgacaagtctatcattttat
gccgctcaagctctactgtccaatatcacggcacatacacgttacgcaacaactatattc
cccaaaacaaaacatctatcacagttcggtagaattggccaattagcttggtttgaagac
tcagctgtcatagataatttgattcgcttcacatttattatcccaaatgtgagatcaaca
acgccatccgtatggtctctcaatgaatcaacacactctagtggtggtcgatttgaagaa
tgcgctctcggtcttatggccccaatcaggaaattcgtcgccaggcaaagtatgttcgtt
ccagataaacgcttagtacagttcgattgcggtaaattgcagattttggcaacactactc
cgaaagctgaaacaggacggtcacaaagcattgatattcacccaaatgacaaaaatgctg
gatgtattagaagcatttctgaacttgcacggctacacatattgtcgccttgatggtagc
accggtgctgagcagcgccagttactcatgcaacggttcaatagcgataaaagacttttt
gtctttattttgtcaacacgttccggcggatttggtatcaacttaacaggagcagacacc
gttattttttatgattctgattggaatccggcgatggaccagcaagctcaagatcgctgc
catcgtatcggtcagacgcgggaagtgcatatttaccgtttgataagcgaagggacaatt
gaagagagtatacttcagaaagcggtccagaaacgtgaattagacaacatggcgatccaa
ttgggcaatttcaatacgacgtcattcagtacacagcaggcacattcgcaacaacatgct
gtctctggtgagactttggaaaatgaggctatgtttgagcaaaaaagatttgaacgaata
catgatgttgcagcgctaggggagagcgctgccgcccacacgactgaaaatactgtagac
gaacactacaaatcacaactacagagtgaagatacgtttgacctgcaagcactcttacca
gttgaaaagtatgcgctcctcaagtgcgctgcacaaagttga
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